Evidence map›Paper›PMID 29970928›Full record

ArticleEuropean journal of human genetics : EJHG2018

Multi-level genomic analyses suggest new genetic variants involved in human memory.

Zijian Zhu, Biqing Chen, Hongming Yan, Wan Fang, Qin Zhou, Shanbi Zhou, Han Lei, Ailong Huang, Tingmei Chen, Tianming Gao and 7 more

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Children's Greenness Exposure and IQ-Associated DNA Methylation: A Prospective Cohort Study.International journal of environmental research and public health · 2021
    Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Zijian ZhuPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China. zhuzijian0203@163.com.
Biqing ChenPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China. bq_chen@pku.edu.cn.ORCID http://orcid.org/0000-0003-1443-1023
Hongming YanPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China.
Wan FangPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China.
Qin ZhouCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Shanbi ZhouUniversity-Town Hospital of Chongqing Medical University, 401331, Chongqing, China.
Han LeiCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Ailong HuangCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Tingmei ChenCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Tianming GaoState Key Laboratory of Organ Failure Research, Guangdong Provincial Key Laboratory of Psychiatric Disorders, Collaborative Innovation Center for Brain Science, Department of Neurobiology, Southern Medical University, 510515, Guangzhou, China.
Liang ChenBiostime institute of nutrition and care, 510623, Guangzhou, China.
Jieyu ChenSchool of Traditional Chinese Medicine, Southern Medical University, 510515, Guangzhou, China.
Dongsheng NiDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Yuping GuDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Jianing LiuDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Wenxia ZhangPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China.
Yi RaoPKU-IDG/McGovern Institute for Brain Research, Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Beijing Innovation Center for Genomics, Peking University, 100871, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Development of high-throughput genotyping platforms provides an opportunity to identify new genetic elements related to complex cognitive functions. Taking advantage of multi-level genomic analysis, here we studied the genetic basis of human short-term (STM, n = 1623) and long-term (LTM, n = 1522) memory functions. Heritability estimation based on single nucleotide polymorphism showed moderate (61%, standard error 35%) heritability of short-term memory but almost zero heritability of long-term memory. We further performed a two-step genome-wide association study, but failed to find any SNPs that could pass genome-wide significance and survive replication at the same time. However, suggestive significance for rs7011450 was found in the shared component of the two STM tasks. Further inspections on its nearby gene zinc finger and at-hook domain containing and SNPs around this gene showed suggestive association with STM. In LTM, a polymorphism within branched chain amino acid transaminase 2 showed suggestive significance in the discovery cohort and has been replicated in another independent population of 1862. Furthermore, we performed a pathway analysis based on the current genomic data and found pathways including mTOR signaling and axon guidance significantly associated with STM capacity. These findings warrant further replication in other larger populations.

Indexed as

MemoryPolymorphism, Single NucleotideAdolescentFemaleGene Regulatory NetworksGenome-Wide Association StudyHumansMaleMinor Histocompatibility AntigensPregnancy ProteinsTOR Serine-Threonine KinasesTransaminasesTranscription FactorsYoung AdultBCAT2 protein, humanMinor Histocompatibility AntigensPregnancy ProteinsTOR Serine-Threonine KinasesTransaminasesTranscription FactorsZFAT protein, human

Identifiers

PMID29970928
PMCPMC6189113

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.