Evidence map›Paper›PMID 29970918›Full record

ArticleEmerging microbes & infections2018

Emergence and spread of carbapenem-resistant Acinetobacter baumannii international clones II and III in Lima, Peru.

Saúl Levy-Blitchtein, Ignasi Roca, Stefany Plasencia-Rebata, William Vicente-Taboada, Jorge Velásquez-Pomar, Laura Muñoz, Javier Moreno-Morales, Maria J Pons, Juana Del Valle-Mendoza, Jordi Vila

Abstract read
In one paragraph

Article in Emerging microbes & infections, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. The (un)successful global spread ofMicrobial genomics · 2026
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  7. Phylogenomic analysis of aquatic and clinical OXA-23-positiveOne health (Amsterdam, Netherlands) · 2025
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  8. Microbiology spectrum · 2025
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  9. Emergence of carbapenem-resistantAntimicrobial agents and chemotherapy · 2025
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  12. Characterization and genomic analysis of the highly virulentAntimicrobial agents and chemotherapy · 2025
    Article
  13. Genomic characterization of multidrug-resistant clinicalFrontiers in cellular and infection microbiology · 2025
    Article
  14. Article
  15. Evaluation of the in vitro activity of ampicillin-sulbactam and cefoperazone-sulbactam against A. Baumannii by the broth disk elution test.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  16. Article
  17. Antimicrobial agents and chemotherapy · 2024
    Article
  18. Article
  19. Article
  20. Antimicrobial resistance genes harbored in invasiveFrontiers in cellular and infection microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Saúl Levy-BlitchteinSchool of Medicine, Research and Innovation Centre of the Faculty of Health Sciences, Universidad Peruana de Ciencias Aplicadas, 15067, Lima, Peru.
Ignasi RocaISGlobal, Hospital Clínic - Universitat de Barcelona, 08036, Barcelona, Spain. Ignasi.roca@isglobal.org.ORCID http://orcid.org/0000-0002-1800-1576
Stefany Plasencia-RebataSchool of Medicine, Research and Innovation Centre of the Faculty of Health Sciences, Universidad Peruana de Ciencias Aplicadas, 15067, Lima, Peru.
William Vicente-TaboadaInstituto Nacional de Enfermedades Neoplásicas, 15038, Lima, Peru.
Jorge Velásquez-PomarHospital Nacional Arzobispo Loayza, 15082, Lima, Peru.
Laura MuñozISGlobal, Hospital Clínic - Universitat de Barcelona, 08036, Barcelona, Spain.
Javier Moreno-MoralesISGlobal, Hospital Clínic - Universitat de Barcelona, 08036, Barcelona, Spain.
Maria J PonsSchool of Medicine, Research and Innovation Centre of the Faculty of Health Sciences, Universidad Peruana de Ciencias Aplicadas, 15067, Lima, Peru.
Juana Del Valle-MendozaSchool of Medicine, Research and Innovation Centre of the Faculty of Health Sciences, Universidad Peruana de Ciencias Aplicadas, 15067, Lima, Peru.
Jordi VilaISGlobal, Hospital Clínic - Universitat de Barcelona, 08036, Barcelona, Spain.

Funding

Generalitat de Catalunya (Government of Catalonia) SLT002/16/00349Government of Catalonia | Departament d'Universitats, Recerca i Societat de la Informació (DURSI) 2014 SGR 0653Ministry of Economy and Competitiveness | Instituto de Salud Carlos III (Institute of Health Carlos III) PI17/01932, RD12/0015/0013, RD16/0016/0010
6 · The paper itself

Abstract

Carbapenem-resistant Acinetobacter baumannii is the top-ranked pathogen in the World Health Organization priority list of antibiotic-resistant bacteria. It emerged as a global pathogen due to the successful expansion of a few epidemic lineages, or international clones (ICs), producing acquired class D carbapenemases (OXA-type). During the past decade, however, reports regarding IC-I isolates in Latin America are scarce and are non-existent for IC-II and IC-III isolates. This study evaluates the molecular mechanisms of carbapenem resistance and the epidemiology of 80 non-duplicate clinical samples of A. baumannii collected from February 2014 through April 2016 at two tertiary care hospitals in Lima. Almost all isolates were carbapenem-resistant (97.5%), and susceptibility only remained high for colistin (95%). Pulsed-field gel electrophoresis showed two main clusters spread between both hospitals: cluster D containing 51 isolates (63.8%) associated with sequence type 2 (ST2) and carrying OXA-72, and cluster F containing 13 isolates (16.3%) associated with ST79 and also carrying OXA-72. ST2 and ST79 were endemic in at least one of the hospitals. ST1 and ST3 OXA-23-producing isolates were also identified. They accounted for sporadic hospital isolates. Interestingly, two isolates carried the novel OXA-253 variant of OXA-143 together with an upstream novel insertion sequence (ISAba47). While the predominant A. baumannii lineages in Latin America are linked to ST79, ST25, ST15, and ST1 producing OXA-23 enzymes, we report the emergence of highly resistant ST2 (IC-II) isolates in Peru producing OXA-72 and the first identification of ST3 isolates (IC-III) in Latin America, both considered a serious threat to public health worldwide.

Indexed as

beta-Lactam ResistanceAcinetobacter baumanniiAcinetobacter InfectionsCarbapenemsCommunicable Diseases, EmergingElectrophoresis, Gel, Pulsed-FieldGenes, BacterialHumansMicrobial Sensitivity TestsMultilocus Sequence TypingPeruCarbapenems

Identifiers

PMID29970918
PMCPMC6030224

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.