Evidence map›Paper›PMID 29967542›Full record

ArticleNature structural & molecular biology2018

Mechanism of parkin activation by phosphorylation.

Véronique Sauvé, George Sung, Naoto Soya, Guennadi Kozlov, Nina Blaimschein, Lis Schwartz Miotto, Jean-François Trempe, Gergely L Lukacs, Kalle Gehring

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 110 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed, 1 pooled it
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 1 synthesis or guideline pooled it, 196 citations in OpenAlex.

  1. Pooled it
  2. Pleiotropic effects for Parkin and LRRK2 in leprosy type-1 reactions and Parkinson's disease.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Trial
  3. Article
  4. Species-dependent activities of the PINK1-parkin axis.Translational neurodegeneration · 2026
    Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
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  15. MTFR1L is a cardiac antiaging factor for maintenance of mitochondrial homeostasis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  16. Review
  17. Review
  18. Review
  19. Review
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Véronique SauvéDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-5981-4573
George SungDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-3146-6095
Naoto SoyaMcGill Centre for Structural Biology, McGill University, Montreal, Quebec, Canada.ORCID 0000-0003-0086-4389
Guennadi KozlovDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada.
Nina BlaimscheinDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada.
Lis Schwartz MiottoDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada.
Jean-François TrempeMcGill Centre for Structural Biology, McGill University, Montreal, Quebec, Canada. jeanfrancois.trempe@mcgill.ca.ORCID 0000-0002-6543-3371
Gergely L LukacsMcGill Centre for Structural Biology, McGill University, Montreal, Quebec, Canada.
Kalle GehringDepartment of Biochemistry, McGill University, Montreal, Quebec, Canada. kalle.gehring@mcgill.ca.ORCID 0000-0001-6500-1184
McGill University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in the ubiquitin ligase parkin are responsible for a familial form of Parkinson's disease. Parkin and the PINK1 kinase regulate a quality-control system for mitochondria. PINK1 phosphorylates ubiquitin on the outer membrane of damaged mitochondria, thus leading to recruitment and activation of parkin via phosphorylation of its ubiquitin-like (Ubl) domain. Here, we describe the mechanism of parkin activation by phosphorylation. The crystal structure of phosphorylated Bactrocera dorsalis (oriental fruit fly) parkin in complex with phosphorylated ubiquitin and an E2 ubiquitin-conjugating enzyme reveals that the key activating step is movement of the Ubl domain and release of the catalytic RING2 domain. Hydrogen/deuterium exchange and NMR experiments with the various intermediates in the activation pathway confirm and extend the interpretation of the crystal structure to mammalian parkin. Our results rationalize previously unexplained Parkinson's disease mutations and the presence of internal linkers that allow large domain movements in parkin.

Indexed as

AnimalsCrystallography, X-RayEnzyme ActivationHumansInsect ProteinsModels, MolecularMutationPhosphorylationProtein ConformationProtein Interaction Domains and MotifsRatsTephritidaeUbiquitin-Protein LigasesInsect Proteinsparkin proteinUbiquitin-Protein Ligases

Identifiers

PMID29967542
OpenAlexW2810701500

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.