Evidence map›Paper›PMID 29967381›Full record

ArticleNature communications2018

Dedicated surveillance mechanism controls G-quadruplex forming non-coding RNAs in human mitochondria.

Zbigniew Pietras, Magdalena A Wojcik, Lukasz S Borowski, Maciej Szewczyk, Tomasz M Kulinski, Dominik Cysewski, Piotr P Stepien, Andrzej Dziembowski, Roman J Szczesny

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 97 citations in OpenAlex.

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  13. Mitochondrial RNA in Inflammation.International journal of biological sciences · 2025
    Review
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  18. Spatial detection of mitochondrial DNA and RNA in tissues.Frontiers in cell and developmental biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Zbigniew PietrasInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.
Magdalena A WojcikInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.
Lukasz S BorowskiInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.ORCID http://orcid.org/0000-0003-3766-0726
Maciej SzewczykInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.ORCID http://orcid.org/0000-0001-7424-1120
Tomasz M KulinskiInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.ORCID http://orcid.org/0000-0003-2830-9491
Dominik CysewskiInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.ORCID http://orcid.org/0000-0001-6206-0672
Piotr P StepienInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland.
Andrzej DziembowskiInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland. andrzejd@ibb.waw.pl.ORCID http://orcid.org/0000-0001-8492-7572
Roman J SzczesnyInstitute of Biochemistry and Biophysics Polish Academy of Sciences, Laboratory of RNA Biology and Functional Genomics, Pawinskiego 5A, 02-106, Warsaw, Poland. rszczesny@ibb.waw.pl.ORCID http://orcid.org/0000-0002-0686-1632
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLInstitute of Agricultural and Food Biotechnology · PLInternational Institute of Molecular and Cell Biology · PL

Funding

EC | European Research Council (ERC) 309419 PAPs & PUPs to ADNarodowe Centrum Nauki (National Science Centre) UMO-2013/11/13/NZ1/00089 to PPSNarodowe Centrum Nauki (National Science Centre) UMO-2014/12/W/NZ1/00463 to RJSNarodowe Centrum Nauki (National Science Centre) UMO-2014/13/D/NZ2/01114 to RJS
6 · The paper itself

Abstract

The GC skew in vertebrate mitochondrial genomes results in synthesis of RNAs that are prone to form G-quadruplexes (G4s). Such RNAs, although mostly non-coding, are transcribed at high rates and are degraded by an unknown mechanism. Here we describe a dedicated mechanism of degradation of G4-containing RNAs, which is based on cooperation between mitochondrial degradosome and quasi-RNA recognition motif (qRRM) protein GRSF1. This cooperation prevents accumulation of G4-containing transcripts in human mitochondria. In vitro reconstitution experiments show that GRSF1 promotes G4 melting that facilitates degradosome-mediated decay. Among degradosome and GRSF1 regulated transcripts we identified one that undergoes post-transcriptional modification. We show that GRSF1 proteins form a distinct qRRM group found only in vertebrates. The appearance of GRSF1 coincided with changes in the mitochondrial genome, which allows the emergence of G4-containing RNAs. We propose that GRSF1 appearance is an evolutionary adaptation enabling control of G4 RNA.

Indexed as

G-QuadruplexesAnimalsDEAD-box RNA HelicasesEndoribonucleasesExoribonucleasesGenome, MitochondrialHEK293 CellsHeLa CellsHumansMitochondriaMitochondrial ProteinsMultienzyme ComplexesPhylogenyPoly(A)-Binding ProteinsPolyribonucleotide NucleotidyltransferaseRNA HelicasesDEAD-box RNA HelicasesdegradosomeEndoribonucleasesExoribonucleasesGRSF1 protein, humanMitochondrial ProteinsMultienzyme ComplexesPNPT1 protein, humanPoly(A)-Binding ProteinsPolyribonucleotide NucleotidyltransferaseRNA HelicasesRNA, Small InterferingRNA, UntranslatedSUPV3L1 protein, human

Identifiers

PMID29967381
PMCPMC6028389
OpenAlexW2809909697

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.