Evidence map›Paper›PMID 29967171›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Mechanistic insights in transcription-coupled nucleotide excision repair of ribosomal DNA.

Laurianne Daniel, Elena Cerutti, Lise-Marie Donnio, Julie Nonnekens, Christophe Carrat, Simona Zahova, Pierre-Olivier Mari, Giuseppina Giglia-Mari

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Advances in the structure and function of the nucleolar protein fibrillarin.Frontiers in cell and developmental biology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  16. The DNA damage response to transcription stress.Nature reviews. Molecular cell biology · 2019
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Laurianne DanielInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France.
Elena CeruttiInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France.
Lise-Marie DonnioInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France.
Julie NonnekensInstitut de Pharmacologie et de Biologie Structurale, CNRS UMR 5089, Université Paul Sabatier, BP64182, F-31077 Toulouse, France.
Christophe CarratInstitut de Pharmacologie et de Biologie Structurale, CNRS UMR 5089, Université Paul Sabatier, BP64182, F-31077 Toulouse, France.
Simona ZahovaInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France.
Pierre-Olivier MariInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France.
Giuseppina Giglia-MariInstitut NeuroMyoGène, CNRS UMR 5310, INSERM U1217, Université de Lyon, Université Claude Bernard Lyon 1, 69622 Villeurbanne CEDEX, France; ambra.mari@univ-lyon1.fr.ORCID 0000-0003-2001-1965
Université Claude Bernard Lyon 1 · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide excision repair (NER) guarantees genome integrity against UV light-induced DNA damage. After UV irradiation, cells have to cope with a general transcriptional block. To ensure UV lesions repair specifically on transcribed genes, NER is coupled with transcription in an extremely organized pathway known as transcription-coupled repair. In highly metabolic cells, more than 60% of total cellular transcription results from RNA polymerase I activity. Repair of the mammalian transcribed ribosomal DNA has been scarcely studied. UV lesions severely block RNA polymerase I activity and the full transcription-coupled repair machinery corrects damage on actively transcribed ribosomal DNAs. After UV irradiation, RNA polymerase I is more bound to the ribosomal DNA and both are displaced to the nucleolar periphery. Importantly, the reentry of RNA polymerase I and the ribosomal DNA is dependent on the presence of UV lesions on DNA and independent of transcription restart.

Indexed as

DNA RepairTranscription, GeneticCell Line, TransformedDNA, RibosomalHumansRNA Polymerase IUltraviolet RaysDNA, RibosomalRNA Polymerase Ihuman ribosomal DNAnucleolar organizationnucleotide excision repairRNAP1 transcriptionUV lesions

Identifiers

PMID29967171
PMCPMC6055190
OpenAlexW2810827251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.