Evidence map›Paper›PMID 29964038›Full record

ArticleGastroenterology2018

Vitamin D Regulation of the Uridine Phosphorylase 1 Gene and Uridine-Induced DNA Damage in Colon in African Americans and European Americans.

Nobel Bhasin, Dereck Alleyne, Olivia A Gray, Sonia S Kupfer

Abstract readComparative Study
In one paragraph

Article in Gastroenterology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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  13. Vitamin D supplementation and colorectal cancer prognosis.Medical oncology (Northwood, London, England) · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nobel BhasinSection of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Chicago, Chicago, Illinois.
Dereck AlleyneSection of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Chicago, Chicago, Illinois.
Olivia A GrayDepartment of Human Genetics, University of Chicago, Chicago, Illinois.
Sonia S KupferSection of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Chicago, Chicago, Illinois. Electronic address: skupfer@medicine.bsd.uchicago.edu.
University of Chicago · US

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
Colonic responses to vitamin D and aspirin in African- and European-AmericansR01CA220329 · NCI · UNIVERSITY OF CHICAGO · PI KUPFER, SONIA · 2018 to 2022
$1.9M
Host-environment interactions in colorectal cancer disparitiesR21CA215380 · NCI · UNIVERSITY OF CHICAGO · PI KUPFER, SONIA · 2017 to 2018
$388k
NCI NIH HHS R01 CA220329NCI NIH HHS R21 CA215380NIDDK NIH HHS P30 DK042086
6 · The paper itself

Abstract

BACKGROUND &

aimsAfrican Americans have the greatest colorectal cancer (CRC) burden in the United States; interethnic differences in protective effects of vitamin D might contribute to disparities. 1α,25(OH)

methodsWe quantified expression and activity of UPP1 in response to 1α,25(OH)

resultsVitamin D increased levels of UPP1 mRNA, protein, and enzymatic activity and increased vitamin D receptor binding to the UPP1 promoter in young adult mouse colonic cells, LS174T cells, and organoids. 1α,25(OH)

conclusionsWe found vitamin D to increase expression of UPP1, leading to reduce uridine-induced DNA damage, in colon cells and organoids. A polymorphism in UPP1 found more frequently in African Americans than European Americans reduced UPP1 expression upon cell exposure to 1α,25(OH)

Indexed as

AnimalsBinding SitesBlack or African AmericanCalcitriolCell LineColonCytoprotectionDNA DamageEpithelial CellsGene Expression Regulation, EnzymologicHumansMiceOrganoidsPolymorphism, GeneticPromoter Regions, GeneticReceptors, CalcitriolCalcitriolReceptors, CalcitriolUPP1 protein, humanUridineUridine PhosphorylaseCRCEthnicityGeneticsRisk Factor

Identifiers

PMID29964038
PMCPMC6866230
OpenAlexW2810506291

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.