Evidence map›Paper›PMID 29963848›Full record

ArticleACS chemical biology2018

Lipidomics Suggests a New Role for Ceramide Synthase in Phagocytosis.

Divya Pathak, Neelay Mehendale, Shubham Singh, Roop Mallik, Siddhesh S Kamat

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

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  12. Metabolic transitions regulate global protein fatty acylation.The Journal of biological chemistry · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Divya PathakDepartment of Biological Sciences , Tata Institute of Fundamental Research (TIFR) , Homi Bhabha Road , Mumbai 400005 , India.
Neelay MehendaleDepartment of Biology , Indian Institute of Science Education and Research (IISER) , Dr. Homi Bhabha Road , Pashan, Pune 411008 , India.
Shubham SinghDepartment of Biology , Indian Institute of Science Education and Research (IISER) , Dr. Homi Bhabha Road , Pashan, Pune 411008 , India.
Roop MallikDepartment of Biological Sciences , Tata Institute of Fundamental Research (TIFR) , Homi Bhabha Road , Mumbai 400005 , India.
Siddhesh S KamatDepartment of Biology , Indian Institute of Science Education and Research (IISER) , Dr. Homi Bhabha Road , Pashan, Pune 411008 , India.ORCID 0000-0001-6132-7574
Indian Institute of Science Education and Research Pune · INTata Institute of Fundamental Research · IN

Funding

DBT-Wellcome Trust India Alliance IA/I/15/2/502058DBT-Wellcome Trust India Alliance IA/S/19/2/504634
6 · The paper itself

Abstract

Phagocytosis is an evolutionarily conserved biological process where pathogens or cellular debris are cleared by engulfing them in a membrane-enclosed cellular compartment called the phagosome. The formation, maturation, and subsequent degradation of a phagosome is an important immune response essential for protection against many pathogens. Yet, the global lipid profile of phagosomes remains unknown, especially as a function of their maturation in immune cells. Here, we show using mass spectrometry based quantitative lipidomics that the ceramide class of lipids, especially very long chain ceramides, are enriched on maturing phagosomes with a concomitant decrease in the biosynthetic precursors of ceramides. We thus posit a new function for the enzyme ceramide synthase during phagocytosis in mammalian macrophages. Biochemical assays, cellular lipid feeding experiments, and pharmacological blockade of ceramide synthase together show that this enzyme indeed controls the flux of ceramides on maturing phagosomes. We also find similar results in the primitive eukaryote Dictyostelium discoideum, suggesting that ceramide enrichment may be evolutionarily conserved and likely an indispensible step in phagosome maturation.

Indexed as

AnimalsCeramidesDictyosteliumMacrophagesMetabolomicsMiceOxidoreductasesPhagocytosisPhagosomesProtozoan ProteinsRAW 264.7 CellsCeramidesdihydroceramide desaturaseOxidoreductasesProtozoan Proteins

Identifiers

PMID29963848
PMCPMC6102644
OpenAlexW2811029332

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.