Evidence map›Paper›PMID 29959834›Full record

ArticleJournal of biomedical optics2018

Terapixel hyperspectral whole-slide imaging via slit-array detection and projection.

Jun Liao, Shaowei Jiang, Zibang Zhang, Kaikai Guo, Zichao Bian, Yutong Jiang, Jingang Zhong, Guoan Zheng

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Thyroid Carcinoma Detection on Whole Histologic Slides Using Hyperspectral Imaging and Deep Learning.Proceedings of SPIE--the International Society for Optical Engineering
    Article
  8. An automatic whole-slide hyperspectral imaging microscope.Proceedings of SPIE--the International Society for Optical Engineering
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jun LiaoUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.
Shaowei JiangUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.
Zibang ZhangJinan University, Department of Optoelectronic Engineering, Guangzhou, China.
Kaikai GuoUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.
Zichao BianUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.
Yutong JiangUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.
Jingang ZhongJinan University, Department of Optoelectronic Engineering, Guangzhou, China.
Guoan ZhengUniversity of Connecticut, Department of Biomedical Engineering, Storrs, Connecticut, United States.

Funding

Fourier Ptychographic EndoscopyR21EB022378 · NIBIB · UNIVERSITY OF ARIZONA · PI LIANG, RONGGUANG, ZHENG, GUOAN · 2016 to 2017
$419k
Fluorescence ptychographic microscopy for 4D live-cell imaging with high-spatiotemporal resolution and reduced phototoxicityR03EB022144 · NIBIB · UNIVERSITY OF CONNECTICUT STORRS · PI ZHENG, GUOAN · 2016 to 2017
$148k
NIBIB NIH HHS R03 EB022144NIBIB NIH HHS R21 EB022378
6 · The paper itself

Abstract

Digital pathology via whole-slide imaging (WSI) systems has recently been approved for the primary diagnostic use in the US. Acquiring whole-slide images with spectral information at each pixel permits the use of multiplexed antibody labeling and allow for the measurement of cellularly resolved chemical information. Here, we report the development of a high-throughput terapixel hyperspectral WSI system using prism-based slit-array dispersion. We demonstrate a slit-array detection scheme for absorption-based measurements and a slit-array projection scheme for fluorescence-based measurements. The spectral resolution and spectral range in the reported schemes can be adjusted by changing the orientation of the slit-array mask. We use our system to acquire 74 5-megapixel brightfield images at different wavelengths in ∼1  s, corresponding to a throughput of 0.375  gigapixels  /  s. A terapixel whole-slide spatial-spectral data cube can be obtained in ∼45  min. The reported system is compatible with existing WSI systems and can be developed as an add-on module for whole-slide spectral imaging. It may find broad applications in high-throughput chemical imaging with multiple antibody labeling. The use of slit array for structured illumination may also provide insights for developing high-throughput hyperspectral confocal imaging systems.

Indexed as

Equipment DesignFemaleHumansImage EnhancementImage Processing, Computer-AssistedLasersMicroscopy, ConfocalMicroscopy, FluorescenceMicrospheresPapanicolaou TestPhantoms, Imaginghigh-throughput imaginghyperspectral imagingslit-array modulationwhole-slide imaging

Identifiers

PMID29959834
PMCPMC8357323

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.