Evidence map›Paper›PMID 29959578›Full record

ArticleJournal of fluorescence2018

Aggregation Behavior of pHLIP in Aqueous Solution at Low Concentrations: A Fluorescence Study.

Bhagyashree D Rao, Hirak Chakraborty, Sandro Keller, Amitabha Chattopadhyay

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of fluorescence, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Activity and characterization of a pH-sensitive antimicrobial peptide.Biochimica et biophysica acta. Biomembranes · 2019
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Bhagyashree D RaoCSIR-Indian Institute of Chemical Technology, Uppal Road, Hyderabad, 500 007, India.
Hirak ChakrabortyCSIR-Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad, 500 007, India.
Sandro KellerMolecular Biophysics, Technische Universität Kaiserslautern, Erwin-Schrödinger-Str. 13, 67663, Kaiserslautern, Germany.
Amitabha ChattopadhyayAcademy for Scientific and Innovative Research, Ghaziabad, India. amit@ccmb.res.in.
Academy of Scientific and Innovative Research · INCentre for Cellular and Molecular Biology · INUniversity of Kaiserslautern · DE

Funding

Council of Scientific and Industrial Research Senior Research AssociateshipDepartment of Science and Technology, Ministry of Science and Technology (EMR/2016/002294)Phospholipid Research Center Financial supportUniversity Grants Commission (F.4-5(138-FRP)/2014(BSR))University Grants Commission Senior Research Fellowship
6 · The paper itself

Abstract

pH (low) insertion peptide (pHLIP) is a 36-residue peptide derived from the third transmembrane helix of the membrane protein bacteriorhodopsin. The hydrophobicity of this peptide makes it prone to aggregation even at low concentrations, but this has not been studied in detail. In this work, we characterized monomeric and aggregated forms of pHLIP in aqueous solution (pH 8) at low concentrations (~μM) using fluorescence-based approaches, complemented by circular dichroism (CD) spectroscopy. We show here that monomeric and aggregated pHLIP display differential red edge excitation shift (REES) and CD spectra. These spectroscopic features allowed us to show that pHLIP aggregates even at low concentrations. A detailed knowledge of the aggregation behavior of pHLIP under these conditions will be useful for monitoring and quantifying its interaction with membranes.

Indexed as

FluorescenceCircular DichroismHydrogen-Ion ConcentrationHydrophobic and Hydrophilic InteractionsPeptidesProtein AggregatesSolutionsSpectrometry, FluorescenceWaterPeptidesProtein AggregatesSolutionsWaterCD spectroscopyLow concentrationPeptide aggregationpHLIPREES

Identifiers

PMID29959578
OpenAlexW2810024002

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.