Evidence map›Paper›PMID 29959019›Full record

ArticleInternational journal of biological macromolecules2018

A two-domain folding intermediate of RuBisCO in complex with the GroEL chaperonin.

Ramanathan Natesh, Daniel K Clare, George W Farr, Arthur L Horwich, Helen R Saibil

Open access · hybridAbstract read
In one paragraph

Article in International journal of biological macromolecules, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Structural basis of substrate progression through the bacterial chaperonin cycle.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Ramanathan NateshCrystallography and Institute of Structural and Molecular Biology, Birkbeck College London, Malet Street, London, WC1E 7HX, UK.
Daniel K ClareCrystallography and Institute of Structural and Molecular Biology, Birkbeck College London, Malet Street, London, WC1E 7HX, UK.
George W FarrDepartment of Genetics, Yale University School of Medicine, Boyer Center, 295 Congress Avenue, New Haven, CT 06510, USA.
Arthur L HorwichDepartment of Genetics, Yale University School of Medicine, Boyer Center, 295 Congress Avenue, New Haven, CT 06510, USA; Howard Hughes Medical Institute, Yale University School of Medicine, 295 Congress Avenue, New Haven, CT 06510, USA.
Helen R SaibilCrystallography and Institute of Structural and Molecular Biology, Birkbeck College London, Malet Street, London, WC1E 7HX, UK. Electronic address: h.saibil@mail.cryst.bbk.ac.uk.
Institute of Structural and Molecular Biology · GBHoward Hughes Medical Institute · USYale University · US

Funding

Wellcome Trust 079605Wellcome Trust 089050
6 · The paper itself

Abstract

The chaperonins (GroEL and GroES in Escherichia coli) are ubiquitous molecular chaperones that assist a subset of essential substrate proteins to undergo productive folding to the native state. Using single particle cryo EM and image processing we have examined complexes of E. coli GroEL with the stringently GroE-dependent substrate enzyme RuBisCO from Rhodospirillum rubrum. Here we present snapshots of non-native RuBisCO - GroEL complexes. We observe two distinct substrate densities in the binary complex reminiscent of the two-domain structure of the RuBisCO subunit, so that this may represent a captured form of an early folding intermediate. The occupancy of the complex is consistent with the negative cooperativity of GroEL with respect to substrate binding, in accordance with earlier mass spectroscopy studies.

Indexed as

Protein FoldingChaperonin 60Escherichia coliModels, MolecularProtein BindingProtein DomainsRhodospirillum rubrumRibulose-Bisphosphate CarboxylaseChaperonin 60Ribulose-Bisphosphate CarboxylaseChaperoninGroELNon-native proteinProtein foldingRuBisCOSingle particle cryo-EM

Identifiers

PMID29959019
PMCPMC6096091
OpenAlexW2810731519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.