Evidence map›Paper›PMID 29958276›Full record

ArticlePloS one2018

Altered circadian genes expression in breast cancer tissue according to the clinical characteristics.

Monika Lesicka, Ewa Jabłońska, Edyta Wieczorek, Barbara Seroczyńska, Anna Siekierzycka, Jarosław Skokowski, Leszek Kalinowski, Wojciech Wąsowicz, Edyta Reszka

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 70 citations in OpenAlex.

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  12. Major roles of the circadian clock in cancer.Cancer biology & medicine · 2023
    Review
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  17. Cell-type-specific epigenomic variations associated withNAR genomics and bioinformatics · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Monika LesickaDepartment of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Lodz, Poland.ORCID 0000-0003-2095-8681
Ewa JabłońskaDepartment of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Lodz, Poland.
Edyta WieczorekDepartment of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Lodz, Poland.
Barbara SeroczyńskaDepartment of Medical Laboratory Diagnostics and Bank of Frozen Tissues and Genetic Specimens, Medical University of Gdansk, Gdansk, Poland.
Anna SiekierzyckaDepartment of Medical Laboratory Diagnostics and Bank of Frozen Tissues and Genetic Specimens, Medical University of Gdansk, Gdansk, Poland.
Jarosław SkokowskiDepartment of Medical Laboratory Diagnostics and Bank of Frozen Tissues and Genetic Specimens, Medical University of Gdansk, Gdansk, Poland.
Leszek KalinowskiDepartment of Medical Laboratory Diagnostics and Bank of Frozen Tissues and Genetic Specimens, Medical University of Gdansk, Gdansk, Poland.
Wojciech WąsowiczDepartment of Biological and Environmental Monitoring, Nofer Institute of Occupational Medicine, Lodz, Poland.
Edyta ReszkaDepartment of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Lodz, Poland.
Nofer Institute of Occupational Medicine · PLGdańsk Medical University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer has a multifactorial etiology. One of the supposed and novel mechanisms is an alteration of circadian gene expression. Circadian genes play a crucial role in many physiological processes. These processes, such as genomic stability, DNA repair mechanism and apoptosis, are frequently disrupted in breast tumors. To assess the significance of circadian gene expression in breast cancer, we carried out an analysis of CLOCK, BMAL1, NPAS2, PER1, PER2, PER3 and CRY1, CRY2, TIMELESS, CSNK1E expression by the use of the quantitative Real-Time PCR technique in tumor tissue and non-tumor adjacent normal tissue sampled from 107 women with a newly diagnosed disease. The obtained data were compared to the clinical and histopathological features. PER1, PER2, PER3, CRY2 were found to be significantly down-expressed, while CLOCK, TIMELESS were over-expressed in the studied tumor samples compared to the non-tumor samples. Only gene expression of CRY1 was significantly down-regulated with progression according to the TNM classification. We found significantly decreased expression of CRY2, PER1, PER2 genes in the ER/PR negative breast tumors compared to the ER/PR positive tumors. Additionally, expression of CRY2, NPAS2 genes had a decreased level in the poorly differentiated tumors in comparison with the well and moderately differentiated ones. Our results indicate that circadian gene expression is altered in breast cancer tissue, which confirms previous observations from various animal and in vitro studies.

Indexed as

Breast NeoplasmsCarcinomaCircadian ClocksCircadian Rhythm Signaling Peptides and ProteinsFemaleGene ExpressionGene Expression Regulation, NeoplasticHumansMiddle AgedNeoplasm GradingNeoplasm StagingCircadian Rhythm Signaling Peptides and Proteins

Identifiers

PMID29958276
PMCPMC6025856
OpenAlexW2810826647

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.