Evidence map›Paper›PMID 29955957›Full record

ArticleHuman genetics2018

De novo variants in GREB1L are associated with non-syndromic inner ear malformations and deafness.

Isabelle Schrauwen, Elina Kari, Jacob Mattox, Lorida Llaci, Joanna Smeeton, Marcus Naymik, David W Raible, James A Knowles, J Gage Crump, Matthew J Huentelman and 1 more

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 48 citations in OpenAlex.

  1. Case report of a novelJournal of otology · 2025
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  19. Use of Zebrafish in Drug Discovery Toxicology.Chemical research in toxicology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Isabelle SchrauwenMolecular and Human Genetics Department, Center for Statistical Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX, 77030, USA. isabelle.schrauwen@gmail.com.ORCID http://orcid.org/0000-0001-7310-6082
Elina KariDivision of Otolaryngology, Head and Neck Surgery, Department of Surgery, University of California, San Diego, ECOB-East Campus Office Building Room 3-013, 9444 Medical Center Drive, Mail Code 7220, La Jolla, CA, 92037, USA.
Jacob MattoxTina and Rick Caruso Department of Otolaryngology-Head and Neck Surgery, Keck University of Southern California School of Medicine, 1975 Zonal Ave., Los Angeles, CA, 90033, USA.
Lorida LlaciNeurogenomics Division and Center for Rare Childhood Disorders, Translational Genomics Research Institute, 445 N 5th str, Phoenix, AZ, 85004, USA.
Joanna SmeetonDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California Keck School of Medicine, 1975 Zonal Ave., Los Angeles, CA, 90033, USA.
Marcus NaymikNeurogenomics Division and Center for Rare Childhood Disorders, Translational Genomics Research Institute, 445 N 5th str, Phoenix, AZ, 85004, USA.
David W RaibleDepartment of Biological Structure, University of Washington, 1959 NE Pacific Street, Seattle, WA, 98195, USA.
James A KnowlesDepartment of Cell Biology-MSC 5, SUNY Downstate Medical Center, 450 Clarkson Avenue, BSB 2-5, Brooklyn, NY, 11203, USA.
J Gage CrumpDepartment of Stem Cell Biology and Regenerative Medicine, University of Southern California Keck School of Medicine, 1975 Zonal Ave., Los Angeles, CA, 90033, USA.
Matthew J HuentelmanNeurogenomics Division and Center for Rare Childhood Disorders, Translational Genomics Research Institute, 445 N 5th str, Phoenix, AZ, 85004, USA.
Rick A FriedmanDivision of Otolaryngology, Head and Neck Surgery, Department of Surgery, University of California, San Diego, ECOB-East Campus Office Building Room 3-013, 9444 Medical Center Drive, Mail Code 7220, La Jolla, CA, 92037, USA.
Translational Genomics Research Institute · USUniversity of Southern California · USUniversity of California San Diego · USSUNY Downstate Health Sciences University · USUniversity of Washington · US

Funding

Genetics of Zebrafish Hair Cell ToxicityR01DC005987 · NIDCD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 2003 to 2023
$9.8M
Progenitor Regulation in Craniofacial Development and RegenerationR35DE027550 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CRUMP, GAGE D · 2017 to 2024
$8.0M
High-Resolution Mapping of Susceptibility Genes for NIHLR01DC010856 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI FRIEDMAN, RICK A · 2011 to 2015
$2.2M
Mitochondrial function and dysfunction in hair cellsR01DC015783 · NIDCD · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 2017 to 2021
$1.6M
National Institutes of Health R01 010856NIDCD NIH HHS R01 DC005987NIDCD NIH HHS R01 DC010856NIDCD NIH HHS R01 DC015783NIDCR NIH HHS R35 DE027550
6 · The paper itself

Abstract

Congenital inner ear malformations affecting both the osseous and membranous labyrinth can have a devastating impact on hearing and language development. With the exception of an enlarged vestibular aqueduct, non-syndromic inner ear malformations are rare, and their underlying molecular biology has thus far remained understudied. To identify molecular factors that might be important in the developing inner ear, we adopted a family-based trio exome sequencing approach in young unrelated subjects with severe inner ear malformations. We identified two previously unreported de novo loss-of-function variants in GREB1L [c.4368G>T;p.(Glu1410fs) and c.982C>T;p.(Arg328*)] in two affected subjects with absent cochleae and eighth cranial nerve malformations. The cochlear aplasia in these affected subjects suggests that a developmental arrest or problem at a very early stage of inner ear development exists, e.g., during the otic pit formation. Craniofacial Greb1l RNA expression peaks in mice during this time frame (E8.5). It also peaks in the developing inner ear during E13-E16, after which it decreases in adulthood. The crucial function of Greb1l in craniofacial development is also evidenced in knockout mice, which develop severe craniofacial abnormalities. In addition, we show that Greb1l

Indexed as

AnimalsDeafnessDisease Models, AnimalEar, InnerEpithelial CellsGanglia, ParasympatheticGene Expression Regulation, DevelopmentalHumansLabyrinth DiseasesMembrane ProteinsMiceMice, KnockoutNeoplasm ProteinsProteinsZebrafishZebrafish ProteinsGREB1 protein, humangreb1 protein, zebrafishKIAA0575 protein, mouseMembrane ProteinsNeoplasm ProteinsProteinsZebrafish Proteins

Identifiers

PMID29955957
PMCPMC6082420
OpenAlexW2810342674

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.