Evidence map›Paper›PMID 29952545›Full record

ArticleBiochemistry2018

Mechanism of Substrate Recognition and Catalysis of the Haloalkanoic Acid Dehalogenase Family Member α-Phosphoglucomutase.

Chunchun Zhang, Karen N Allen, Debra Dunaway-Mariano

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Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Chunchun ZhangTesting & Analytical Center , Sichuan University , Chengdu , Sichuan 610064 , People's Republic of China.
Karen N AllenDepartment of Chemistry , Boston University , Boston , Massachusetts 02215-2521 , United States.ORCID 0000-0001-7296-0551
Debra Dunaway-MarianoDepartment of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , United States.ORCID 0000-0001-6045-1207
Boston University · USSichuan University · CNUniversity of New Mexico · US

Funding

STRUCTURAL AND MECHANISTIC STUDIES OF PHOSPHONATASER01GM061099 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ALLEN, KAREN N. · 2000 to 2009
$3.2M
NIGMS NIH HHS R01 GM061099
6 · The paper itself

Abstract

α-Phosphoglucomutase (αPGM), in its phosphorylated state, catalyzes the interconversion of α-d-glucose 1-phosphate and α-d-glucose 6-phosphate. The αPGM of Lactococcus lactis is a type C2B member of the haloalkanoic acid dehalogenase (HAD) enzyme family and is comprised of a Rossmann-fold catalytic domain and inserted α/β-fold cap domain. The active site is formed at the domain-domain interface. Herein, we report the results from a kinetic-based study of L. lactis αPGM catalysis, which demonstrate enzyme activation by autocatalyzed phosphorylation of Asp8 with αG1P, the intermediacy of αG1,6bisP in the phospho Ll-αPGM-catalyzed conversion of αG1P to G6P, and the reorientation of the αG1,6bisP intermediate via dissociation to solvent and rebinding. In order to provide insight into the structural determinants of L. lactis αPGM substrate recognition and catalysis, metal cofactor and substrate specificities were determined as were the contributions made by active-site residues toward catalytic efficiency. Lastly, the structure and catalytic mechanism of L. lactis αPGM are compared with those of HAD family phosphomutases L. lactis β-phosphoglucomutase and eukayotic α-phosphomannomutase to provide insight into the evolution of phosphohexomutases from HAD family phosphatases.

Indexed as

Catalytic DomainCrystallography, X-RayEnzyme ActivationGlucose-6-PhosphateGlucosephosphatesKineticsLactococcus lactisModels, MolecularPhosphoglucomutasePhosphorylationProtein ConformationSubstrate Specificityglucose-1-phosphateGlucose-6-PhosphateGlucosephosphatesPhosphoglucomutase

Identifiers

PMID29952545
PMCPMC10725300
OpenAlexW2811493622

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.