Evidence map›Paper›PMID 29951760›Full record

ArticleEnvironmental science and pollution research international2018

Bacterial microbiome of root-associated endophytes of Salicornia europaea in correspondence to different levels of salinity.

Sonia Szymańska, Luigimaria Borruso, Lorenzo Brusetti, Piotr Hulisz, Bliss Furtado, Katarzyna Hrynkiewicz

Open access · hybridAbstract read
In one paragraph

Article in Environmental science and pollution research international, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 70 citations in OpenAlex.

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  11. Mitigation of salt stress inFrontiers in plant science · 2024
    Article
  12. Phytohormone Production by the EndophytePlants (Basel, Switzerland) · 2023
    Article
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  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sonia SzymańskaDepartment of Microbiology, Faculty of Biology and Environmental Protection, N. Copernicus University in Torun, Lwowska 1, Toruń, Poland.
Luigimaria BorrusoFaculty of Science and Technology, Free University of Bozen - Bolzano, Piazza Università 5, 39100, Bolzano, Italy.
Lorenzo BrusettiFaculty of Science and Technology, Free University of Bozen - Bolzano, Piazza Università 5, 39100, Bolzano, Italy.
Piotr HuliszDepartment of Soil Science and Landscape Management, Faculty of Earth Sciences, N. Copernicus University in Torun, Lwowska 1, Toruń, Poland.
Bliss FurtadoDepartment of Microbiology, Faculty of Biology and Environmental Protection, N. Copernicus University in Torun, Lwowska 1, Toruń, Poland.
Katarzyna HrynkiewiczDepartment of Microbiology, Faculty of Biology and Environmental Protection, N. Copernicus University in Torun, Lwowska 1, Toruń, Poland. hrynk@umk.pl.
Nicolaus Copernicus University · PLFree University of Bozen-Bolzano · IT

Funding

National Science Centre (Poland) DEC-2012/07/ B/NZ9/01801
6 · The paper itself

Abstract

The halophytes have evolved several strategies to survive in saline environments; however, an additional support from their associated microbiota helps combat adverse conditions. Hence, our driving interests to investigate the endophytic bacterial community richness, diversity, and composition associated to roots of Salicornia europaea from two test sites with different origins of soil salinity. We assumed that salinity will have a negative effect on the diversity of endophytes but simultaneously will permit the high occurrence of halophylic bacteria. Further, to establish the role of the host and its external environment in determining the endophytic diversity, we analyzed the physico-chemical parameters of root zone soil and the concentration of salt ions in the plant roots. The results based on the Miseq Illumina sequencing approach revealed a higher number of endophytic bacterial OTUs at naturally saline test site with a higher level of soil salinity. Proteobacteria and Bacteriodetes were the dominant endophytic phyla at both analyzed sites; additionally, the high occurrence of Planctomycetes and Acidobacteria at more saline site and the occurrence of Firmicutes, Actinobacteria, and Chloroflexi at less saline site were recorded. The salinity in the root zone soil was crucial in structuring the endophytic community of S. europaea, and the significant prevalence of representatives from the phyla Deltaproteobacteria, Acidobacteria, Caldithrix, Fibrobacteres, and Verrucomicrobia at the more saline test site suggest domination of halophylic bacteria with potential role in mitigation of salt stress of halophytes.

Indexed as

Soil MicrobiologyBacteriaBiodiversityChenopodiaceaeEndophytesMicrobiotaPlant RootsSalinitySalt ToleranceSalt-Tolerant PlantsSodium ChlorideSoilSodium ChlorideSoilBacteriaEndophytesHalophyteMicrobiomeS. europaeaSoil salinity

Identifiers

PMID29951760
PMCPMC6133108
OpenAlexW2810679223

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.