Evidence map›Paper›PMID 29951048›Full record

ArticleFrontiers in microbiology2018

Sediment Microbial Communities Influenced by Cool Hydrothermal Fluid Migration.

Laura A Zinke, Brandi Kiel Reese, James McManus, Charles G Wheat, Beth N Orcutt, Jan P Amend

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Laura A ZinkeMarine and Environmental Biology Section, University of Southern California, Los Angeles, CA, United States.
Brandi Kiel ReeseDepartment of Life Sciences, Texas A&M University - Corpus Christi, Corpus Christi, TX, United States.
James McManusDepartment of Geosciences, The University of Akron, Akron, OH, United States.
Charles G WheatGlobal Undersea Research Unit, University of Alaska Fairbanks, Moss Landing, CA, United States.
Beth N OrcuttBigelow Laboratory for Ocean Sciences, East Boothbay, ME, United States.
Jan P AmendMarine and Environmental Biology Section, University of Southern California, Los Angeles, CA, United States.
University of Southern California · USBigelow Laboratory for Ocean Sciences · USTexas A&M University – Corpus Christi · USUniversity of Akron · USUniversity of Alaska Fairbanks · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cool hydrothermal systems (CHSs) are prevalent across the seafloor and discharge fluid volumes that rival oceanic input from rivers, yet the microbial ecology of these systems are poorly constrained. The Dorado Outcrop on the ridge flank of the Cocos Plate in the northeastern tropical Pacific Ocean is the first confirmed CHS, discharging minimally altered <15°C fluid from the shallow lithosphere through diffuse venting and seepage. In this paper, we characterize the resident sediment microbial communities influenced by cool hydrothermal advection, which is evident from nitrate and oxygen concentrations. 16S rRNA gene sequencing revealed that Thaumarchaea, Proteobacteria, and Planctomycetes were the most abundant phyla in all sediments across the system regardless of influence from seepage. Members of the Thaumarchaeota (Marine Group I), Alphaproteobacteria (Rhodospirillales), Nitrospirae, Nitrospina, Acidobacteria, and Gemmatimonadetes were enriched in the sediments influenced by CHS advection. Of the various geochemical parameters investigated, nitrate concentrations correlated best with microbial community structure, indicating structuring based on seepage of nitrate-rich fluids. A comparison of microbial communities from hydrothermal sediments, seafloor basalts, and local seawater at Dorado Outcrop showed differences that highlight the distinct niche space in CHS. Sediment microbial communities from Dorado Outcrop differ from those at previously characterized, warmer CHS sediment, but are similar to deep-sea sediment habitats with surficial ferromanganese nodules, such as the Clarion Clipperton Zone. We conclude that cool hydrothermal venting at seafloor outcrops can alter the local sedimentary oxidation-reduction pathways, which in turn influences the microbial communities within the fluid discharge affected sediment.

Indexed as

cool hydrothermal systemsdeep seaDorado Outcrophydrothermal sedimentnitrogen

Identifiers

PMID29951048
PMCPMC6008377
OpenAlexW2804418610

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.