Evidence map›Paper›PMID 29950685›Full record

ArticleScientific reports2018

Keratinocyte differentiation induces APOBEC3A, 3B, and mitochondrial DNA hypermutation.

Kousho Wakae, Tomoaki Nishiyama, Satoru Kondo, Takashi Izuka, Lusheng Que, Cong Chen, Kina Kase, Kouichi Kitamura, Md Mohiuddin, Zhe Wang and 9 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Mitochondrial Epigenetics Regulating Inflammation in Cancer and Aging.Frontiers in cell and developmental biology · 2022
    Review
  7. Review
  8. Article
  9. Mitochondrial DNA: Epigenetics and environment.Environmental and molecular mutagenesis · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 2 countries.

Kousho WakaeDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan. wakae@med.kanazawa-u.ac.jp.
Tomoaki NishiyamaAdvanced Science Research Center, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.ORCID 0000-0003-1279-7806
Satoru KondoDivision of Otorhinolaryngology and Head and Neck Surgery, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Takashi IzukaDepartment of Obstetrics and Gynecology, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Lusheng QueDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.ORCID 0000-0001-8509-9473
Cong ChenDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Kina KaseDivision of Otorhinolaryngology and Head and Neck Surgery, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Kouichi KitamuraDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.ORCID 0000-0001-9692-8724
Md MohiuddinDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Zhe WangDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Md Monjurul AhasanDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Mitsuhiro NakamuraDepartment of Obstetrics and Gynecology, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Hiroshi FujiwaraDepartment of Obstetrics and Gynecology, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Tomokazu YoshizakiDivision of Otorhinolaryngology and Head and Neck Surgery, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Kazuyoshi HosomochiDepartment of Bioinformatics and Genomics, Graduate School of Advanced Preventive Medical Sciences, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.
Atsushi TajimaDepartment of Bioinformatics and Genomics, Graduate School of Advanced Preventive Medical Sciences, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan.ORCID 0000-0001-6808-5491
Tomomi NakaharaDivision of Carcinogenesis and Cancer Prevention, National Cancer Center Research Institute, Tokyo, 104-0045, Japan.
Tohru KiyonoDivision of Carcinogenesis and Cancer Prevention, National Cancer Center Research Institute, Tokyo, 104-0045, Japan.ORCID 0000-0003-1769-403X
Masamichi MuramatsuDepartment of Molecular Genetics, Graduate School of Medical Science, Kanazawa University, Kanazawa, Ishikawa, 920-8640, Japan. muramatsu@nih.go.jp.
Kanazawa University · JPGenesis Research Institute · JP

Funding

Japan Society for the Promotion of Science (JSPS) 16K15281Japan Society for the Promotion of Science (JSPS) 26293103Japan Society for the Promotion of Science (JSPS) 26460993Japan Society for the Promotion of Science (JSPS) 26861318
6 · The paper itself

Abstract

Mitochondrial DNA (mtDNA) mutations are found in many types of cancers and suspected to be involved in carcinogenesis, although the mechanism has not been elucidated. In this study, we report that consecutive C-to-T mutations (hypermutations), a unique feature of mutations induced by APOBECs, are found in mtDNA from cervical dysplasia and oropharyngeal cancers. In vitro, we found that APOBEC3A (A3A) and 3B (A3B) expression, as well as mtDNA hypermutation, were induced in a cervical dysplastic cell line W12 when cultured in a differentiating condition. The ectopic expression of A3A or A3B was sufficient to hypermutate mtDNA. Fractionation of W12 cell lysates and immunocytochemical analysis revealed that A3A and A3B could be contained in mitochondrion. These results suggest that mtDNA hypermutation is induced upon keratinocyte differentiation, and shed light on its molecular mechanism, which involves A3s. The possible involvement of mtDNA hypermutations in carcinogenesis is also discussed.

Indexed as

Cell DifferentiationCell LineCytidine DeaminaseDNA, MitochondrialFemaleHumansIn Vitro TechniquesKeratinocytesMinor Histocompatibility AntigensMutationOropharyngeal NeoplasmsProteinsUterine Cervical DysplasiaAPOBEC3A protein, humanAPOBEC3B protein, humanCytidine DeaminaseDNA, MitochondrialMinor Histocompatibility AntigensProteins

Identifiers

PMID29950685
PMCPMC6021414
OpenAlexW2809343888

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.