Evidence map›Paper›PMID 29950589›Full record

ArticleNature communications2018

A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.

Sam J B Mallinson, Melodie M Machovina, Rodrigo L Silveira, Marc Garcia-Borràs, Nathan Gallup, Christopher W Johnson, Mark D Allen, Munir S Skaf, Michael F Crowley, Ellen L Neidle and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
16.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 228 citations in OpenAlex.

  1. Article
  2. Review
  3. Discovery of pseudobaptigenin synthase in fungal-infected Trifolium pratense roots.The Plant journal : for cell and molecular biology · 2026
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  7. Whole-genomic and transcriptomic analyses elucidateApplied and environmental microbiology · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Metabolic mechanism of lignin-derived aromatics in white-rot fungi.Applied microbiology and biotechnology · 2024
    Review
  18. Article
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Sam J B MallinsonMolecular Biophysics, School of Biological Sciences, Institute of Biological and Biomedical Sciences, University of Portsmouth, Portsmouth, PO1 2DY, UK.
Melodie M MachovinaNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID http://orcid.org/0000-0003-2130-6001
Rodrigo L SilveiraNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Marc Garcia-BorràsDepartment of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA, 90095, USA.ORCID http://orcid.org/0000-0001-9458-1114
Nathan GallupNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.
Christopher W JohnsonNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID http://orcid.org/0000-0002-2979-4751
Mark D AllenMolecular Biophysics, School of Biological Sciences, Institute of Biological and Biomedical Sciences, University of Portsmouth, Portsmouth, PO1 2DY, UK.
Munir S SkafInstitute of Chemistry, University of Campinas, Campinas, Sao Paulo, 13083-970, Brazil.ORCID http://orcid.org/0000-0001-7485-1228
Michael F CrowleyBiosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA.ORCID http://orcid.org/0000-0001-5163-9398
Ellen L NeidleDepartment of Microbiology, University of Georgia, Athens, GA, 30602, USA.ORCID http://orcid.org/0000-0003-1665-5303
Kendall N HoukDepartment of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA, 90095, USA. houk@chem.ucla.edu.
Gregg T BeckhamNational Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. gregg.beckham@nrel.gov.ORCID http://orcid.org/0000-0002-3480-212X
Jennifer L DuBoisDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, MT, 59717, USA. jennifer.dubois1@montana.edu.
John E McGeehanMolecular Biophysics, School of Biological Sciences, Institute of Biological and Biomedical Sciences, University of Portsmouth, Portsmouth, PO1 2DY, UK. john.mcgeehan@port.ac.uk.ORCID http://orcid.org/0000-0002-6750-1462
National Laboratory of the Rockies · USUniversity of Portsmouth · GBUniversity of California, Los Angeles · USMontana State University · USUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Georgia · US

Funding

Biotechnology and Biological Sciences Research Council (BBSRC) BB/L001926/1Biotechnology and Biological Sciences Research Council (BBSRC) BB/P011918/1NSF | BIO | Division of Environmental Biology (DEB) DEB-1556541NSF | BIO | Division of Molecular and Cellular Biosciences (MCB) MCB-1615365NSF | BIO | Division of Molecular and Cellular Biosciences (MCB) MCB-1715176NSF | Directorate for Mathematical & Physical Sciences | Division of Chemistry (CHE) CHE-1361104
6 · The paper itself

Abstract

Microbial aromatic catabolism offers a promising approach to convert lignin, a vast source of renewable carbon, into useful products. Aryl-O-demethylation is an essential biochemical reaction to ultimately catabolize coniferyl and sinapyl lignin-derived aromatic compounds, and is often a key bottleneck for both native and engineered bioconversion pathways. Here, we report the comprehensive characterization of a promiscuous P450 aryl-O-demethylase, consisting of a cytochrome P450 protein from the family CYP255A (GcoA) and a three-domain reductase (GcoB) that together represent a new two-component P450 class. Though originally described as converting guaiacol to catechol, we show that this system efficiently demethylates both guaiacol and an unexpectedly wide variety of lignin-relevant monomers. Structural, biochemical, and computational studies of this novel two-component system elucidate the mechanism of its broad substrate specificity, presenting it as a new tool for a critical step in biological lignin conversion.

Indexed as

ActinobacteriaBacterial ProteinsCytochrome P-450 Enzyme SystemLigninOxidation-ReductionOxidoreductases, O-DemethylatingProtein MultimerizationSubstrate SpecificityBacterial ProteinsCytochrome P-450 Enzyme SystemLigninOxidoreductases, O-Demethylating

Identifiers

PMID29950589
PMCPMC6021390
OpenAlexW2809109896

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.