Evidence map›Paper›PMID 29949759›Full record

ArticleCell reports2018

The PARP1-Siah1 Axis Controls HIV-1 Transcription and Expression of Siah1 Substrates.

Dan Yu, Rongdiao Liu, Geng Yang, Qiang Zhou

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. NADThe Journal of general virology · 2026
    Review
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  18. NADFrontiers in molecular biosciences · 2021
    Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Dan YuDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Rongdiao LiuSchool of Pharmaceutical Sciences, Xiamen University, Xiamen, Fujian 361005, China.
Geng YangDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.
Qiang ZhouDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; School of Pharmaceutical Sciences, Xiamen University, Xiamen, Fujian 361005, China. Electronic address: qzhou@berkeley.edu.
University of California, Berkeley · USXiamen University · CN

Funding

REGULATION OF TRANSCRIPTIONAL ELONGATION BY HIV1 TATR01AI041757 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI ZHOU, QIANG · 1997 to 2019
$6.6M
NIAID NIH HHS R01 AI041757
6 · The paper itself

Abstract

Recent studies have revealed a key role of PARP1 that catalyzes the poly-ADP-ribosylation (PARylation) of substrates in regulating gene transcription. We show here that HIV-1 transcriptional activation also requires PARP1 activity. Because efficient HIV-1 transactivation is known to depend on the ELL2-containing super elongation complex (SEC), we investigated the functional relationship between PARP1 and ELL2-SEC in HIV-1 transcriptional control. We show that PARP1 elevates ELL2 protein levels to form more ELL2-SEC in cells. This effect is caused by PARP1's suppression of expression of Siah1, an E3 ubiquitin ligase for ELL2, at both mRNA and protein levels. At the mRNA level, PARP1 coordinates with the co-repressor NCoR to suppress Siah1 transcription. At the protein level, PARP1 promotes Siah1 proteolysis, likely through inducing PARylation-dependent ubiquitination (PARdU) of Siah1. Thus, a PARP1-Siah1 axis activates HIV-1 transcription and controls the expression of ELL2 and other Siah1 substrates.

Indexed as

Cell Line, TumorHIV-1HumansNuclear ProteinsPhthalazinesPiperazinesPoly (ADP-Ribose) Polymerase-1Promoter Regions, GeneticProtein-Tyrosine KinasesSeven in Absentia Proteinstat Gene Products, Human Immunodeficiency VirusTranscriptional ActivationTranscriptional Elongation FactorsTranscription, GeneticUbiquitin-Protein LigasesELL2 protein, humanNuclear ProteinsolaparibPARP1 protein, humanPhthalazinesPiperazinesPoly (ADP-Ribose) Polymerase-1Protein-Tyrosine KinasesSeven in Absentia Proteinstat Gene Products, Human Immunodeficiency VirusTNK2 protein, humanTranscriptional Elongation FactorsUbiquitin-Protein LigasesE3 ubiquitin ligase Siah1ELL2HIV-1 transcriptionPARdUPARP1PARylationPARylation-dependent ubiquitinationPoly(ADP-Ribosyl)ationSECsuper elongation complex

Identifiers

PMID29949759
PMCPMC6223328
OpenAlexW2810660756

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.