Evidence map›Paper›PMID 29949626›Full record

ArticlePloS one2018

Multi-trait multi-environment Bayesian model reveals G x E interaction for nitrogen use efficiency components in tropical maize.

Lívia Gomes Torres, Mateus Cupertino Rodrigues, Nathan Lamounier Lima, Tatiane Freitas Horta Trindade, Fabyano Fonseca E Silva, Camila Ferreira Azevedo, Rodrigo Oliveira DeLima

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lívia Gomes TorresDepartment of Plant Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Mateus Cupertino RodriguesDepartment of Plant Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.ORCID 0000-0002-6371-8816
Nathan Lamounier LimaDepartment of Plant Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Tatiane Freitas Horta TrindadeDepartment of Plant Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.ORCID 0000-0001-6674-4908
Fabyano Fonseca E SilvaDepartment of Animal Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Camila Ferreira AzevedoDepartment of Statistics, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
Rodrigo Oliveira DeLimaDepartment of Plant Science, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.ORCID 0000-0001-9291-8422

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying maize inbred lines that are more efficient in nitrogen (N) use is an important strategy and a necessity in the context of environmental and economic impacts attributed to the excessive N fertilization. N-uptake efficiency (NUpE) and N-utilization efficiency (NUtE) are components of N-use efficiency (NUE). Despite the most maize breeding data have a multi-trait structure, they are often analyzed under a single-trait framework. We aimed to estimate the genetic parameters for NUpE and NUtE in contrasting N levels, in order to identify superior maize inbred lines, and to propose a Bayesian multi-trait multi-environment (MTME) model. Sixty-four tropical maize inbred lines were evaluated in two experiments: at high (HN) and low N (LN) levels. The MTME model was compared to single-trait multi-environment (STME) models. Based on deviance information criteria (DIC), both multi- and single-trait models revealed genotypes x environments (G x E) interaction. In the MTME model, NUpE was found to be weakly heritable with posterior modes of heritability of 0.016 and 0.023 under HN and LN, respectively. NUtE at HN was found to be highly heritable (0.490), whereas under LN condition it was moderately heritable (0.215). We adopted the MTME model, since combined analysis often presents more accurate breeding values than single models. Superior inbred lines for NUpE and NUtE were identified and this information can be used to plan crosses to obtain maize hybrids that have superior nitrogen use efficiency.

Indexed as

Bayes TheoremEnvironmentQuantitative Trait, HeritableAlgorithmsModels, StatisticalNitrogenTropical ClimateZea maysNitrogen

Identifiers

PMID29949626
PMCPMC6021093

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.