Evidence map›Paper›PMID 29949229›Full record

ArticlePlant biotechnology journal2019

The auxin receptor TIR1 homolog (PagFBL 1) regulates adventitious rooting through interactions with Aux/IAA28 in Populus.

Wenbo Shu, Houjun Zhou, Cheng Jiang, Shutang Zhao, Liuqiang Wang, Quanzi Li, Zhangqi Yang, Andrew Groover, Meng-Zhu Lu

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Review
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  6. Article
  7. Genes · 2023
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  8. Article
  9. Genome-wide identification ofFrontiers in plant science · 2023
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Transcriptomic profiles of poplar (Frontiers in genetics · 2022
    Article
  17. Auxin and Target of Rapamycin Spatiotemporally Regulate Root Organogenesis.International journal of molecular sciences · 2021
    Review
  18. Article
  19. Adventitious Rooting inFrontiers in plant science · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Wenbo ShuState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.ORCID 0000-0002-2897-7986
Houjun ZhouState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Cheng JiangState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Shutang ZhaoState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Liuqiang WangState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Quanzi LiState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Zhangqi YangGuangxi Academy of Forestry, Nanning, Guangxi, China.
Andrew GrooverUS Forest Service, Pacific Southwest Research Station, Davis, CA, USA.
Meng-Zhu LuState Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Chinese Academy of Forestry · CNGuangxi Academy of Sciences · CNUS Forest Service · US

Funding

Chinese Academy of Forestry, ChinaSpecial Fund for Forest Scientific Research in the Public Welfare 201504101
6 · The paper itself

Abstract

Adventitious roots occur naturally in many species and can also be induced from explants of some tree species including Populus, providing an important means of clonal propagation. Auxin has been identified as playing a crucial role in adventitious root formation, but the associated molecular regulatory mechanisms need to be elucidated. In this study, we examined the role of PagFBL1, the hybrid poplar (Populus alba × P. glandulosa clone 84K) homolog of Arabidopsis auxin receptor TIR1, in adventitious root formation in poplar. Similar to the distribution pattern of auxin during initiation of adventitious roots, PagFBL1 expression was concentrated in the cambium and secondary phloem in stems during adventitious root induction and initiation phases, but decreased in emerging adventitious root primordia. Overexpressing PagFBL1 stimulated adventitious root formation and increased root biomass, while knock-down of PagFBL1 transcript levels delayed adventitious root formation and decreased root biomass. Transcriptome analyses of PagFBL1 overexpressing lines indicated that an extensive remodelling of gene expression was stimulated by auxin signalling pathway during early adventitious root formation. In addition, PagIAA28 was identified as downstream targets of PagFBL1. We propose that the PagFBL1-PagIAA28 module promotes adventitious rooting and could be targeted to improve Populus propagation by cuttings.

Indexed as

Gene Expression Regulation, PlantArabidopsis ProteinsBiomassF-Box ProteinsGene Expression ProfilingIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsPopulusReceptors, Cell SurfaceSignal TransductionArabidopsis ProteinsF-Box ProteinsIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsReceptors, Cell SurfaceTIR1 protein, Arabidopsisadventitious root developmentauxin signallingPagFBL1PagIAA28

Identifiers

PMID29949229
PMCPMC6335065
OpenAlexW2810403548

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.