ArticleGenes & genomics2018
Characterization and phylogenetic analysis of the complete mitogenome of a rare cavefish, Sinocyclocheilus multipunctatus (Cypriniformes: Cyprinidae).
Article in Genes & genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes,Mitochondrial DNA. Part B, Resources · 2025Article
- The Mitochondrial Genome ofGenes · 2023Article
- Characterization and phylogenetic analysis of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2022Article
- Complete mitochondrial genomes of two catfishes (Siluriformes, Bagridae) and their phylogenetic implications.ZooKeys · 2022Article
- Whole-Genome Sequencing ofFrontiers in genetics · 2021Article
- The complete mitochondrial genome ofZooKeys · 2021Article
- The complete mitochondrial genome and phylogenetic analysis ofMitochondrial DNA. Part B, Resources · 2021Article
- Population genetic structure and phylogenetic analysis of gray's pipefish, Halicampus grayi in the South China Sea.Genes & genomics · 2020Article
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Authors and funding
2 authors.
Funding
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Abstract
The genus Sinocyclocheilus is a representative group of cave creatures. However, genetic studies on Sinocyclocheilus are rare. The primary objective of this study was to explore the structure and feature of the complete mitochondrial genome of S. multipunctatus, and reconstruct the mitogenomic phylogeny of Sinocyclocheilus. The mitochondrial DNA of S. multipunctatus was amplified by overlapping PCR fragments. The mitogenome was assembled by the SeqMan and annotated using MitoAnnotator. The phylogenetic tree was established using the Bayesian inference and Maximum likelihood methods. The mitogenome of S. multipunctatus is a typical circular molecule of 16,586 bp with base composition A (31.25%), T (25.90%), G (16.35%), and C (26.50%), and consists of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs) genes, two ribosomal RNAs, and a 931 bp control region. Phylogenetic analysis reveals two clades in the Sinocyclocheilus with robust support. S. multipunctatus is close to a newly discovered cavefish, S. ronganensis. We obtained and described the complete mitogenome of S. multipunctatus, and investigated its phylogenetic status, which may provide a valuable resource for future phylogenetic analyses and population genetic studies in Sinocyclocheilus.
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