Evidence map›Paper›PMID 29948633›Full record

ArticleMolecular biology reports2018

Isolation and characterization of microsatellite markers for exploring introgressive hybridization between the Oratosquilla oratoria complex.

Jiao Cheng, Nan Zhang, Zhong-Li Sha

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jiao ChengInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.ORCID http://orcid.org/0000-0003-0820-7762
Nan ZhangInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China.ORCID http://orcid.org/0000-0002-5759-3797
Zhong-Li ShaInstitute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China. shazl@qdio.ac.cn.ORCID http://orcid.org/0000-0002-2192-3758

Funding

"Key Research Program of Frontier Sciences" of the Chinese Academy of Sciences QYZDB-SSW-DQC036National Natural Science Foundation of China 31401955
6 · The paper itself

Abstract

The Japanese mantis shrimp Oratosquilla oratoria is one of the most dominant stomatopod species found in coastal waters of the northwestern Pacific. We previously reported cryptic speciation and hybridization in this taxon by integrating mitochondrial and nuclear evidence. The present study aims at developing potential useful microsatellite markers for the O. oratoria complex through transcriptome sequencing, with a view to reveal the occurrence of hybridization. Of the 100 tested microsatellites, 55 were experimentally validated. 24 of these microsatellites were transferable across different species of the O. oratoria complex and showed polymorphic among individuals. The average number of alleles, observed and expected heterozygosity per locus was 6.125, 0.446 and 0.577 for the temperate species, and 6.083, 0.444 and 0.578 for the subtropical and tropical species. We also explore genetic differentiation and hybridization between O. oratoria cryptic species using these 24 microsatellite loci. The pairwise F

Indexed as

AllelesAnimalsBayes TheoremCrustaceaDNADNA, MitochondrialGene Expression ProfilingGene FrequencyHybridization, GeneticMicrosatellite RepeatsNucleic Acid HybridizationPhylogenySequence Analysis, RNADNADNA, MitochondrialHybridizationMicrosatelliteOratosquilla oratoriaTranscriptome

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.