Evidence map›Paper›PMID 29948410›Full record

ArticleMycorrhiza2018

Tomato CYCLOPS/IPD3 is required for mycorrhizal symbiosis but not tolerance to Fusarium wilt in mycorrhiza-deficient tomato mutant rmc.

Cahya Prihatna, Nicholas James Larkan, Martin John Barbetti, Susan Jane Barker

Abstract read
PubMed Publisher
In one paragraph

Article in Mycorrhiza, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Re-engineering a lost trait:bioRxiv : the preprint server for biology · 2023
    Article
  7. A Novel Tomato Fusarium Wilt Tolerance Gene.Frontiers in microbiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Cahya PrihatnaSchool of Agriculture and Environment, Faculty of Science, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia. cahya.prihatna@id.wilmar-intl.com.ORCID http://orcid.org/0000-0002-0487-6283
Nicholas James LarkanArmatus Genetics Inc., 450 Melville St, Saskatoon, Saskatchewan, S7J 4M2, Canada.
Martin John BarbettiSchool of Agriculture and Environment, Faculty of Science, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia.
Susan Jane BarkerSchool of Agriculture and Environment, Faculty of Science, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia.
The University of Western Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycorrhizal symbiosis requires several common symbiosis genes including CYCLOPS/IPD3. The reduced mycorrhizal colonisation (rmc) tomato mutant has a deletion of five genes including CYCLOPS/IPD3, and rmc is more susceptible to Fusarium wilt than its wild-type parental line. This study investigated the genetic defects leading to both fungal interaction phenotypes and whether these were separable. Complementation was performed in rmc to test the requirement for CYCLOPS/IPD3 in mycorrhiza formation and Fusarium wilt tolerance. Promoter analysis via GFP expression in roots was conducted to determine the role of native regulatory elements in the proper functioning of CYCLOPS/IPD3. CYCLOPS/IPD3 regulated by its native promoter, but not a 2×35S promoter, restores mycorrhizal association in rmc. GFP regulated by the 2×35S promoter is not expressed in epidermal cells of roots, indicating that expression of CYCLOPS/IPD3 in these cells is required for colonisation by the fungi utilised in this research. CYCLOPS/IPD3 did not restore Fusarium wilt tolerance, however, showing that the genetic requirements for mycorrhizal association and Fusarium wilt tolerance are different. Our results confirm the expected role of CYCLOPS/IPD3 in mycorrhizal symbiosis and suggest that Fusarium tolerance is conferred by one of the other four genes affected by the deletion.

Indexed as

MutationDisease ResistanceFusariumGene DeletionGenetic Complementation TestMycorrhizaePlant DiseasesPlant ProteinsPlant RootsPromoter Regions, GeneticSolanum lycopersicumSymbiosisPlant ProteinsCaMV 2×35S promoterCYCLOPSFusarium wiltIPD3Mycorrhizal symbiosisSolanum lycopersicum

Identifiers

PMID29948410
OpenAlexW2805845199

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.