Evidence map›Paper›PMID 29947897›Full record

ReviewAnalytical and bioanalytical chemistry2018

Mass spectrometry-based proteomics for system-level characterization of biological responses to engineered nanomaterials.

Tong Zhang, Matthew J Gaffrey, Brian D Thrall, Wei-Jun Qian

Abstract readReview
In one paragraph

Review in Analytical and bioanalytical chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tong ZhangBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Matthew J GaffreyBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Brian D ThrallBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Wei-Jun QianBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99352, USA. weijun.qian@pnnl.gov.ORCID http://orcid.org/0000-0002-5393-2827

Funding

Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
Key Events in Modulation of Lung Infection Susceptibility by NanomaterialsU01ES027292 · NIEHS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI QIAN, WEI-JUN · 2016 to 2020
$2.0M
National Institute of Environmental Health Sciences U01ES027292National Institute of General Medical Sciences P41GM103493NIEHS NIH HHS U01 ES027292NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

The widespread use of engineered nanomaterials or nanotechnology makes the characterization of biological responses to nanomaterials an important area of research. The application of omics approaches, such as mass spectrometry-based proteomics, has revealed new insights into the cellular responses of exposure to nanomaterials, including how nanomaterials interact and alter cellular pathways. In addition, exposure to engineered nanomaterials often leads to the generation of reactive oxygen species and cellular oxidative stress, which implicates a redox-dependent regulation of cellular responses under such conditions. In this review, we discuss quantitative proteomics-based approaches, with an emphasis on redox proteomics, as a tool for system-level characterization of the biological responses induced by engineered nanomaterials. Graphical abstract ᅟ.

Indexed as

Oxidative StressSignal TransductionAnimalsDNA DamageEnergy MetabolismHumansMass SpectrometryNanostructuresNanotechnologyOxidation-ReductionProtein Processing, Post-TranslationalProteomeProteomicsReactive Oxygen SpeciesProteomeReactive Oxygen SpeciesEngineered nanomaterialsOxidative stressPost-translational modificationsProteomicsRedox proteomicsThiol

Identifiers

PMID29947897
PMCPMC6119095

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.