Evidence map›Paper›PMID 29947152›Full record

ArticleCancer medicine2018

T cell receptor repertoire profiling predicts the prognosis of HBV-associated hepatocellular carcinoma.

Kai-Rong Lin, Fei-Wen Deng, Ya-Bin Jin, Xiang-Ping Chen, Ying-Ming Pan, Jin-Huan Cui, Zhi-Xuan You, Huan-Wei Chen, Wei Luo

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Kai-Rong LinClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Fei-Wen DengDepartment of Hepatobiliary Surgery, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Ya-Bin JinClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Xiang-Ping ChenClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Ying-Ming PanClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Jin-Huan CuiClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Zhi-Xuan YouZhixin Middle School, Guangzhou, China.
Huan-Wei ChenDepartment of Hepatobiliary Surgery, Foshan Hospital, Sun Yat-sen University, Foshan, China.
Wei LuoClinical Research Institute, Foshan Hospital, Sun Yat-sen University, Foshan, China.ORCID 0000-0002-8836-3804
Sun Yat-sen University · CNFoshan University · CNShenzhen Baoan High School Group · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor-infiltrating T cell repertoire has been demonstrated to be closely associated with anti-tumor immune response. However, the relationship between T cell repertoire in tumor tissue and prognosis has never been reported in Hepatocellular carcinoma (HCC). We performed the high-throughput T cell receptor (TCR) sequencing to systematically characterize the infiltrating T cell repertoires of tumor and matched adjacent normal tissues from 23 HBV-associated HCC patients. Significant differences on usage frequencies of some Vβ, Jβ, and Vβ-Jβ paired genes have been found between the 2 groups of tissue samples, but no significant difference of TCR repertoire diversity could be found. Interestingly, the similarity of TCR repertoires between paired samples or the TNM stage alone could not be helpful to evaluate the prognosis of patients very well, but their combination could serve as an efficient prognostic indicator that the patients with early stage and high similarity showed a better prognosis. This is the first attempt to assess the potential value of TCR repertoire in HCC prognosis, and our findings could serve as a complement for the characterization of TCR repertoire in HCC.

Indexed as

Hepatitis B virusAdultCarcinoma, HepatocellularFemaleGene Expression ProfilingGenetic VariationHepatitis BHigh-Throughput Nucleotide SequencingHumansLiver NeoplasmsMaleMiddle AgedNeoplasm MetastasisNeoplasm StagingPrognosisReceptors, Antigen, T-CellReceptors, Antigen, T-Cellhepatocellular carcinomahigh throughput sequencinginfiltrating T lymphocyteprognosisTCR repertoire

Identifiers

PMID29947152
PMCPMC6089190
OpenAlexW2810736297

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.