Evidence map›Paper›PMID 29945974›Full record

ArticleThe Journal of biological chemistry2018

High-throughput screening with nucleosome substrate identifies small-molecule inhibitors of the human histone lysine methyltransferase NSD2.

Nathan P Coussens, Stephen C Kales, Mark J Henderson, Olivia W Lee, Kurumi Y Horiuchi, Yuren Wang, Qing Chen, Ekaterina Kuznetsova, Jianghong Wu, Sirisha Chakka and 10 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 75 citations in OpenAlex.

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  13. NSD2 as a Promising Target in Hematological Disorders.International journal of molecular sciences · 2022
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  17. The role of NSD1, NSD2, and NSD3 histone methyltransferases in solid tumors.Cellular and molecular life sciences : CMLS · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 1 country.

Nathan P CoussensFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Stephen C KalesFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Mark J HendersonFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Olivia W LeeFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Kurumi Y Horiuchithe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Yuren Wangthe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Qing Chenthe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Ekaterina Kuznetsovathe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Jianghong Wuthe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Sirisha ChakkaFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Dorian M CheffFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Ken Chih-Chien ChengFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Paul ShinnFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Kyle R BrimacombeFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Min ShenFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Anton SimeonovFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Madhu Lal-NagFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.
Haiching Mathe Reaction Biology Corporation, Malvern, Pennsylvania 19355.
Ajit JadhavFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and.ORCID 0000-0001-7955-1451
Matthew D HallFrom the National Center for Advancing Translational Sciences, National Institutes of Health, Rockville, Maryland 20850 and hallma@mail.nih.gov.ORCID 0000-0002-5073-442X
National Institutes of Health · USReaction Biology Corporation (United States) · USNational Center for Advancing Translational Sciences · US

Funding

Trans-NIH RNAi Facility (TNRF)ZICTR000041 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI CHENG, KEN · 2015 to 2025
$9.4M
qHTS to Identify Inhibitors of Mutant and Wildtype NSD2ZIATR000252 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI HALL, MATTHEW · 2016 to 2020
$283k
6 · The paper itself

Abstract

The histone lysine methyltransferase nuclear receptor-binding SET domain protein 2 (NSD2, also known as WHSC1/MMSET) is an epigenetic modifier and is thought to play a driving role in oncogenesis. Both NSD2 overexpression and point mutations that increase its catalytic activity are associated with several human cancers. Although NSD2 is an attractive therapeutic target, no potent, selective, and bioactive small molecule inhibitors of NSD2 have been reported to date, possibly due to the challenges of developing high-throughput assays for NSD2. Here, to establish a platform for the discovery and development of selective NSD2 inhibitors, we optimized and implemented multiple assays. We performed quantitative high-throughput screening with full-length WT NSD2 and a nucleosome substrate against a diverse collection of bioactive small molecules comprising 16,251 compounds. We further interrogated 174 inhibitory compounds identified in the primary screen with orthogonal and counter assays and with activity assays based on the clinically relevant NSD2 variants E1099K and T1150A. We selected five confirmed inhibitors for follow-up, which included a radiolabeled validation assay, surface plasmon resonance studies, methyltransferase profiling, and histone methylation in cells. We found that all five NSD2 inhibitors bind the catalytic SET domain and one exhibited apparent activity in cells, validating the workflow and providing a template for identifying selective NSD2 inhibitors. In summary, we have established a robust discovery pipeline for identifying potent NSD2 inhibitors from small-molecule libraries.

Indexed as

Cell Line, TumorDrug Evaluation, PreclinicalEnzyme InhibitorsHigh-Throughput Screening AssaysHistone-Lysine N-MethyltransferaseHumansNucleosomesRepressor ProteinsSmall Molecule LibrariesEnzyme InhibitorsHistone-Lysine N-MethyltransferaseNSD2 protein, humanNucleosomesRepressor ProteinsSmall Molecule Librariescancerepigeneticshigh-throughput screening (HTS)histone methylationlysine methyltransferase inhibitorMMSETNSD2nucleosomeoncogenesmall moleculeWHSC1

Identifiers

PMID29945974
PMCPMC6120216
OpenAlexW2809914460

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.