Evidence map›Paper›PMID 29944674›Full record

ArticlePloS one2018

Computational quantum chemistry, molecular docking, and ADMET predictions of imidazole alkaloids of Pilocarpus microphyllus with schistosomicidal properties.

Jefferson A Rocha, Nayra C S Rego, Bruna T S Carvalho, Francisco I Silva, Jose A Sousa, Ricardo M Ramos, Ionara N G Passos, Josué de Moraes, Jose R S A Leite, Francisco C A Lima

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 73 citations in OpenAlex.

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  6. Exploring wide gap semiconductor characteristics inJournal of molecular modeling · 2024
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  7. Molecular Docking and ADME-TOX Profiling ofAdvances in respiratory medicine · 2023
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  11. Identification of Potential NewInternational journal of molecular sciences · 2022
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  13. De Novo Design of Cathepsin B1 Inhibitors as Potential Anti-Schistosomal Agents Using Computational Studies.Advances and applications in bioinformatics and chemistry : AABC · 2022
    Article
  14. Constituents of buriti oil (Journal of biomolecular structure & dynamics · 2021
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Jefferson A RochaThe Postgraduate Program of the Northeast Network of Biotechnology, RENORBIO, Focal Point UFPI, Teresina, Piauí, Brazil.ORCID 0000-0001-6619-2293
Nayra C S RegoThe Postgraduate Program of the Northeast Network of Biotechnology, RENORBIO, Focal Point UFPI, Teresina, Piauí, Brazil.
Bruna T S CarvalhoResearch Group in Computational Quantum Chemistry & Pharmaceutical Planning, State University of Piauí, GPQQ&PF / UESPI, Teresina, PI, Brazil.
Francisco I SilvaResearch Group in Computational Quantum Chemistry & Pharmaceutical Planning, State University of Piauí, GPQQ&PF / UESPI, Teresina, PI, Brazil.
Jose A SousaResearch Group in Computational Quantum Chemistry & Pharmaceutical Planning, State University of Piauí, GPQQ&PF / UESPI, Teresina, PI, Brazil.
Ricardo M RamosResearch Laboratory in Information Systems, Department of Information, Environment, Health and Food Production, Federal Institute of Piauí, LAPESI / IFPI, Teresina, PI, Brazil.ORCID 0000-0003-2016-3344
Ionara N G PassosResearch Group in Natural Sciences and Biotechnology, Federal University of Maranhão, CIENATEC / UFMA, Grajaú, MA, Brazil.
Josué de MoraesResearch Center for Neglected Diseases, Guarulhos University, NPDN / UNG, Guarulhos, SP, Brazil.
Jose R S A LeiteArea Morphology, Faculty of Medicine, Campus Darcy Ribeiro, University of Brasília, UnB, Brasília, DF, Brazil.
Francisco C A LimaThe Postgraduate Program of the Northeast Network of Biotechnology, RENORBIO, Focal Point UFPI, Teresina, Piauí, Brazil.
Universidade Estadual do Piauí · BRGuarulhos University · BRInstituto Federal do Piauí · BRUniversidade de Brasília · BRUniversidade Federal do Maranhão · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schistosomiasis affects million people and its control is widely dependent on a single drug, praziquantel. Computational chemistry has led to the development of new tools that predict molecular properties related to pharmacological potential. We conducted a theoretical study of the imizadole alkaloids of Pilocarpus microphyllus (Rutaceae) with schistosomicidal properties. The molecules of epiisopiloturine, epiisopilosine, isopilosine, pilosine, and macaubine were evaluated using theory models (B3lyp/SDD, B3lyp/6-31+G(d,p), B3lyp/6-311++G(d,p)). Absorption, distribution, metabolization, excretion, and toxicity (ADMET) predictions were used to determine the pharmacokinetic and pharmacodynamic properties of the alkaloids. After optimization, the molecules were submitted to molecular docking calculations with the purine nucleoside phosphorylase, thioredoxin glutathione reductase, methylthioadenosine phosphorylase, arginase, uridine phosphorylase, Cathepsin B1 and histone deacetylase 8 enzymes, which are possible targets of Schistosoma mansoni. The results showed that B3lyp/6-311++G(d,p) was the optimal model to describe the properties studied. Thermodynamic analysis showed that epiisopiloturine and epiisopilosine were the most stable isomers; however, the epiisopilosine ligand achieved a superior interaction with the enzymes studied in the molecular docking experiments, which corroborated the results of previous experimental studies on schistosomiasis.

Indexed as

4-ButyrolactoneAlkaloidsAnimalsAnthelminticsImidazolesModels, MolecularMolecular Docking SimulationPilocarpusPlant ExtractsQuantum TheorySchistosoma mansoniThermodynamics4-ButyrolactoneAlkaloidsAnthelminticsepiisopiloturineImidazolespilosinePlant Extracts

Identifiers

PMID29944674
PMCPMC6019389
OpenAlexW2810443508

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.