ArticleMolecular genetics and genomics : MGG2018
Genome-wide identification of the pectate lyase-like (PLL) gene family and functional analysis of two PLL genes in rice.
Article in Molecular genetics and genomics : MGG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed, 59 citations in OpenAlex.
- The OsWRKY15-OsSUT3 Regulatory Module Enhances Rice Pollen Fertility by Mediating Sucrose Allocation to Anthers.Plant biotechnology journal · 2026Article
- Genome-wide identification and expression analysis of the pectate lyase (PEL) gene family in soybean (Glycine max (L.) Merr. ).Genetica · 2026Article
- A major FT/TFL1 regulatory locus (Frontiers in plant science · 2026Article
- The role of pectate lyases in development and stress tolerance in plants.Molecular biology reports · 2025Review
- An allelic resolution gene atlas for tetraploid potato provides insights into tuberization and stress resilience.The Plant journal : for cell and molecular biology · 2025Article
- Association mapping and candidate gene identification for yield traits in European hazelnut (Plant direct · 2024Article
- MdVQ17 negatively regulates apple resistance to Glomerella leaf spot by promoting MdWRKY17-mediated salicylic acid degradation and pectin lyase activity.Horticulture research · 2024Article
- Genome-Wide Identification of the Pectate Lyase Gene Family in Potato and Expression Analysis under Salt Stress.Plants (Basel, Switzerland) · 2024Article
- Comprehensive Analysis of the Pectate Lyase Gene Family and the Role ofInternational journal of molecular sciences · 2023Article
- Genome-wide identification and expression analyses of the pectate lyase (PL) gene family in Fragaria vesca.BMC genomics · 2023Article
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- RicePlants (Basel, Switzerland) · 2021Article
- Deficiencies in the formation and regulation of anther cuticle and tryphine contribute to male sterility in cotton PGMS line.BMC genomics · 2020Article
- Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods.BMC plant biology · 2020Article
- The mutation of a PECTATE LYASE-LIKE gene is responsible for the Yellow Margin phenotype in potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Grain Inorganic Arsenic Content in Rice Managed Through Targeted Introgressions and Irrigation Management.Frontiers in plant science · 2020Article
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
Abstract
Pectate lyase catalyses the eliminative cleavage of de-esterified pectin, which is a major component of primary cell walls in many higher plants. Pectate lyase-like (PLL) genes have been identified in various plant species and are involved in a broad range of physiological processes associated with pectin degradation. Previous studies have functionally identified two PLL genes in rice (Oryza sativa. L). However, the knowledge concerning genome-wide analysis of this family remains limited, and functions of the other PLL genes have not been thoroughly elucidated to date. In this study, we identified 12 PLL genes based on a genome-wide investigation in rice. A complete overview of this gene family is presented, including chromosomal locations, exon-intron structure, cis-acting elements and conserved motifs. PLL protein sequences from multiple plant species were compared and divided into five groups based on phylogenetic analysis. Quantitative RT-PCR analysis revealed that only a portion of OsPLL genes (4 of 12) exhibits detectable expression levels. Notably, OsPLL1, OsPLL3, OsPLL4 and OsPLL12 exhibit strong and preferential expression in panicles suggesting that the potential roles of these genes are crucial during rice panicle development. Moreover, knockdown of OsPLL3 and OsPLL4 by artificial microRNA (amiRNA) disrupted normal pollen development and resulted in partial male sterility. These results could provide valuable information for characterising the functions and dissecting the molecular mechanisms of the OsPLL genes.
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