Evidence map›Paper›PMID 29941954›Full record

ArticleScientific reports2018

Temperature-dependent virus lifecycle choices may reveal and predict facets of the biology of opportunistic pathogenic bacteria.

Halil I Egilmez, Andrew Yu Morozov, Martha R J Clokie, Jinyu Shan, Andrey Letarov, Edouard E Galyov

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 38 citations in OpenAlex.

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  12. International journal of microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Halil I EgilmezDepartment of Mathematics, University of Leicester, Leicester, LE1 7RH, UK.
Andrew Yu MorozovDepartment of Mathematics, University of Leicester, Leicester, LE1 7RH, UK. am379@leicester.ac.uk.
Martha R J ClokieDepartment of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 7RH, UK.
Jinyu ShanDepartment of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 7RH, UK.
Andrey LetarovWinogradsky Institute of Microbiology, RC Biotechnology RAS, Moscow, Russia.
Edouard E GalyovDepartment of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 7RH, UK.
University of Leicester · GBMoscow Institute of Physics and Technology · RU

Funding

Wellcome Trust 092638/Z/10/Z
6 · The paper itself

Abstract

Melioidosis, a serious illness caused by Burkholderia pseudomallei, results in up to 40% fatality in infected patients. The pathogen is found in tropical water and soil. Recent findings demonstrated that bacterial numbers can be regulated by a novel clade of phages that are abundant in soil and water. These phages differentially infect their bacterial hosts causing lysis at high temperatures and lysogeny at lower temperatures. Thus seasonal and daily temperature variations would cause switches in phage-bacteria interactions. We developed mathematical models using realistic parameters to explore the impact of phages on B. pseudomallei populations in the surface water of rice fields over time and under seasonally changing environmental conditions. Historical records were used to provide UV radiation levels and temperature for two Thailand provinces. The models predict seasonal variation of phage-free bacterial numbers correlates with the higher risk of melioidosis acquisition during the "warm and wet" season. We find that enrichment of the environment may lead to irregular large amplitude pulses of bacterial numbers that could significantly increase the probability of disease acquisition. Our results suggest that the phages may regulate B. pseudomallei populations throughout the seasons, and these data can potentially help improve the melioidosis prevention efforts in Southeast Asia.

Indexed as

TemperatureBacteriophagesBurkholderia pseudomalleiLysogenyMelioidosisModels, TheoreticalSeasonsSoil MicrobiologyUltraviolet RaysWater Microbiology

Identifiers

PMID29941954
PMCPMC6018541
OpenAlexW2809661401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.