Evidence map›Paper›PMID 29939710›Full record

ArticleACS applied materials & interfaces2019

Redox Engineering of Cytochrome c using DNA Nanostructure-Based Charged Encapsulation and Spatial Control.

Zhilei Ge, Zhaoming Su, Chad R Simmons, Jiang Li, Shuoxing Jiang, Wei Li, Yang Yang, Yan Liu, Wah Chiu, Chunhai Fan and 1 more

Open access · greenAbstract read
In one paragraph

Article in ACS applied materials & interfaces, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  4. Review
  5. Membrane-Interacting DNA Nanotubes Induce Cancer Cell Death.Nanomaterials (Basel, Switzerland) · 2021
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Zhilei GeCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.ORCID http://orcid.org/0000-0001-7184-7565
Zhaoming SuNational Center of Macromolecular Imaging, Department of Bioengineering and Department of Microbiology and Immunology, James H. Clark Center , Stanford University , Stanford , California 94305 , United States.ORCID http://orcid.org/0000-0002-9279-1721
Chad R SimmonsCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.
Jiang LiDivision of Physical Biology & Bioimaging Center, Shanghai Synchrotron Radiation Facility, Shanghai Institute of Applied Physics , Chinese Academy of Sciences , Shanghai 201800 , China.ORCID http://orcid.org/0000-0003-2372-6624
Shuoxing JiangCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.ORCID http://orcid.org/0000-0002-9235-6447
Wei LiCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.
Yang YangCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.
Yan LiuCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.ORCID http://orcid.org/0000-0003-0906-2606
Wah ChiuNational Center of Macromolecular Imaging, Department of Bioengineering and Department of Microbiology and Immunology, James H. Clark Center , Stanford University , Stanford , California 94305 , United States.
Chunhai FanCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.ORCID http://orcid.org/0000-0002-7171-7338
Hao YanCenter for Molecular Design and Biomimetics, The Biodesign Institute, Department of Chemistry and Biochemistry , Arizona State University , Tempe , Arizona 85287 , United States.ORCID http://orcid.org/0000-0001-7397-9852
Arizona State University · USChinese Academy of Sciences · CNStanford University · US

Funding

The Center for HIV RNA Studies (CRNA)P50GM103297 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SALEMI, MARCO · 2012 to 2016
$21.7M
3 D ELECTRON MICROSCOPY OF MACROMOLECULES (5P41RR002250-27)P41GM103832 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH · 2012 to 2019
$15.1M
NIGMS NIH HHS P41 GM103832NIGMS NIH HHS P50 GM103297
6 · The paper itself

Abstract

Three-dimensional (3D) DNA nanostructures facilitate the directed self-assembly of various objects with designed patterns with nanometer scale addressability. Here, we report the enhancement of cytochrome c (cyt c) redox activity by using a designed 3D DNA nanostructure attached to a gold electrode to spatially control the position of cyt c within the tetrahedral framework. Charged encapsulation and spatial control result in the significantly increased redox potential and enhanced electron transfer of this redox protein when compared to cyt c directly adsorbed on the gold surface. Two different protein attachment sites on one double stranded edge of a DNA tetrahedron were used to position cyt c inside and outside of the cage. Cyt c at both binding sites show similar redox potential shift and only slight difference in the electron transfer rate, both orders of magnitude faster than the cases when the protein was directly deposited on the gold electrode, likely due to an effective electron transfer pathway provided by the stabilization effect of the protein created by the DNA framework. This study shows great potential of using structural DNA nanotechnology for spatial control of protein positioning on electrode, which opens new routes to engineer redox proteins and interface microelectronic devices with biological function.

Indexed as

Cytochromes cDNAElectrochemical TechniquesElectrodesElectron TransportGoldNanostructuresOxidation-ReductionCytochromes cDNAGoldcytochrome cDNA tetrahedronframework nucleic acidsprotein engineering

Identifiers

PMID29939710
PMCPMC6325017
OpenAlexW2811238333

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.