Evidence map›Paper›PMID 29939188›Full record

ArticleJournal of visualized experiments : JoVE2018

Whole-brain Segmentation and Change-point Analysis of Anatomical Brain MRI-Application in Premanifest Huntington's Disease.

Dan Wu, Andreia V Faria, Laurent Younes, Christopher A Ross, Susumu Mori, Michael I Miller

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. A Volumetric Study of the Corpus Callosum in the Turkish Population.Journal of neurological surgery. Part B, Skull base · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dan WuThe Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine; dwu18@jhu.edu.
Andreia V FariaThe Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine.
Laurent YounesCenter for Imaging Science, Johns Hopkins University; Institute for Computational Medicine, Johns Hopkins University; Department of Applied Mathematics and Statistics, Johns Hopkins University.
Christopher A RossDivision of Neurobiology, Departments of Psychiatry, Neurology, Neuroscience and Pharmacology, and Program in Cellular and Molecular Medicine, Johns Hopkins University School of Medicine.
Susumu MoriThe Russell H. Morgan Department of Radiology and Radiological Science, Johns Hopkins University School of Medicine; F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute.
Michael I MillerCenter for Imaging Science, Johns Hopkins University; Institute for Computational Medicine, Johns Hopkins University; Department of Biomedical Engineering, Johns Hopkins University.

Funding

NEUROBIOLOGICAL PREDICTORS OF HUNTINGTON'S DISEASER01NS040068 · NINDS · UNIVERSITY OF IOWA · PI PAULSEN, JANE S · 2001 to 2013
$48.5M
TR&D 4: Algorithms for functional and anatomical brain analysisP41EB015909 · NIBIB · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI VAN ZIJL, PETER CM · 2012 to 2020
$13.1M
SIGNIFICANCE OF EXTRASTRIATAL PATHOLOGY IN HUNTINGTON'S DISEASEP50NS016375 · NINDS · JOHNS HOPKINS UNIVERSITY · PI ROSS, CHRISTOPHER A · 1995 to 2011
$4.2M
Continued Development and Maintenance of MriStudioR01NS084957 · NINDS · JOHNS HOPKINS UNIVERSITY · PI MILLER, MICHAEL I, MORI, SUSUMU · 2013 to 2022
$3.6M
Validation of Structural/Functional MRI LocalizationR01EB000975 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI BARTA, PATRICK E, MILLER, MICHAEL I · 2002 to 2012
$3.0M
3D Shape Analysis for Computational AnatomyR01EB008171 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI MILLER, MICHAEL I · 2009 to 2012
$2.0M
Multi-Scale Electronic Human Brain AtlasR01NS086888 · NINDS · JOHNS HOPKINS UNIVERSITY · PI MORI, SUSUMU · 2014 to 2018
$1.8M
Basal Ganglia Shape Analysis and Circuitry in Huntington's DiseaseU01NS082085 · NINDS · JOHNS HOPKINS UNIVERSITY · PI MILLER, MICHAEL I, ROSS, CHRISTOPHER A · 2012 to 2013
$1.1M
In-utero characterization of embryonic mouse brain development and injury with MRIR21NS098018 · NINDS · JOHNS HOPKINS UNIVERSITY · PI WU, DAN · 2016 to 2017
$461k
NIBIB NIH HHS P41 EB015909NIBIB NIH HHS R01 EB000975NIBIB NIH HHS R01 EB008171NINDS NIH HHS P50 NS016375NINDS NIH HHS R01 NS040068NINDS NIH HHS R01 NS084957NINDS NIH HHS R01 NS086888NINDS NIH HHS R21 NS098018NINDS NIH HHS U01 NS082085
6 · The paper itself

Abstract

Recent advances in MRI offer a variety of useful markers to identify neurodegenerative diseases. In Huntington's disease (HD), regional brain atrophy begins many years prior to the motor onset (during the "premanifest" period), but the spatiotemporal pattern of regional atrophy across the brain has not been fully characterized. Here we demonstrate an online cloud-computing platform, "MRICloud", which provides atlas-based whole-brain segmentation of T1-weighted images at multiple granularity levels, and thereby, enables us to access the regional features of brain anatomy. We then describe a regression model that detects statistically significant inflection points, at which regional brain atrophy starts to be noticeable, i.e. the "change-point", with respect to a disease progression index. We used the CAG-age product (CAP) score to index the disease progression in HD patients. Change-point analysis of the volumetric measurements from the segmentation pipeline, therefore, provides important information of the order and pattern of structural atrophy across the brain. The paper illustrates the use of these techniques on T1-weighted MRI data of premanifest HD subjects from a large multicenter PREDICT-HD study. This design potentially has wide applications in a range of neurodegenerative diseases to investigate the dynamic changes of brain anatomy.

Indexed as

AdultAgedBrainDisease ProgressionFemaleHumansHuntington DiseaseMagnetic Resonance ImagingMaleMiddle Aged

Identifiers

PMID29939188
PMCPMC6101648

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.