Evidence map›Paper›PMID 29937592›Full record

ArticleSIAM review. Society for Industrial and Applied Mathematics2016

AN EVOLUTIONARY MODEL OF TUMOR CELL KINETICS AND THE EMERGENCE OF MOLECULAR HETEROGENEITY DRIVING GOMPERTZIAN GROWTH.

Jeffrey West, Zaki Hasnain, Paul Macklin, Paul K Newton

Abstract read
In one paragraph

Article in SIAM review. Society for Industrial and Applied Mathematics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Gaming the cancer-immunity cycle by synchronizing the dose schedules.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  6. Review
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  15. Cellular interactions constrain tumor growth.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. The prisoner's dilemma as a cancer model.Convergent science physical oncology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jeffrey WestDepartment of Aerospace & Mechanical Engineering, Viterbi School of Engineering and Department of Mathematics, University of Southern California, Los Angeles, CA 90089-1191.
Zaki HasnainDepartment of Aerospace & Mechanical Engineering, Viterbi School of Engineering and Department of Mathematics, University of Southern California, Los Angeles, CA 90089-1191.
Paul MacklinCenter for Applied Molecular Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-1191.
Paul K NewtonDepartment of Aerospace & Mechanical Engineering, Viterbi School of Engineering and Department of Mathematics, University of Southern California, Los Angeles, CA 90089-1191.

Funding

TopologyU54CA143906 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KUHN, PETER · 2009 to 2014
$10.2M
NCI NIH HHS U54 CA143906
6 · The paper itself

Abstract

We describe a cell-molecular based evolutionary mathematical model of tumor development driven by a stochastic Moran birth-death process. The cells in the tumor carry molecular information in the form of a numerical genome which we represent as a four-digit binary string used to differentiate cells into 16 molecular types. The binary string is able to undergo stochastic point mutations that are passed to a daughter cell after each birth event. The value of the binary string determines the cell fitness, with lower fit cells (e.g. 0000) defined as healthy phenotypes, and higher fit cells (e.g. 1111) defined as malignant phenotypes. At each step of the birth-death process, the two phenotypic sub-populations compete in a prisoner's dilemma evolutionary game with the healthy cells playing the role of cooperators, and the cancer cells playing the role of defectors. Fitness, birth-death rates of the cell populations, and overall tumor fitness are defined via the prisoner's dilemma payoff matrix. Mutation parameters include passenger mutations (mutations conferring no fitness advantage) and driver mutations (mutations which increase cell fitness). The model is used to explore key emergent features associated with tumor development, including tumor growth rates as it relates to intratumor molecular heterogeneity. The tumor growth equation states that the growth rate is proportional to the logarithm of cellular diversity/heterogeneity. The Shannon entropy from information theory is used as a quantitative measure of heterogeneity and tumor complexity based on the distribution of the 4-digit binary sequences produced by the cell population. To track the development of heterogeneity from an initial population of healthy cells (0000), we use dynamic phylogenetic trees which show clonal and sub-clonal expansions of cancer cell sub-populations from an initial malignant cell. We show tumor growth rates are not constant throughout tumor development, and are generally much higher in the subclinical range than in later stages of development, which leads to a Gompertzian growth curve. We explain the early exponential growth of the tumor and the later saturation associated with the Gompertzian curve which results from our evolutionary simulations using simple statistical mechanics principles related to the degree of functional coupling of the cell states. We then compare dosing strategies at early stage development, mid-stage (clinical stage), and late stage development of the tumor. If used early during tumor development in the subclinical stage, well before the cancer cell population is selected for growth, therapy is most effective at disrupting key emergent features of tumor development.

Indexed as

birth-death processcancer modelevolutionary game theorygompertzian tumor growthMoran processtumor heterogeneity

Identifiers

PMID29937592
PMCPMC6013275

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.