ArticleSIAM review. Society for Industrial and Applied Mathematics2016
AN EVOLUTIONARY MODEL OF TUMOR CELL KINETICS AND THE EMERGENCE OF MOLECULAR HETEROGENEITY DRIVING GOMPERTZIAN GROWTH.
Article in SIAM review. Society for Industrial and Applied Mathematics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
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- Gaming the cancer-immunity cycle by synchronizing the dose schedules.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
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- DataXflow: Synergizing data-driven modeling with best parameter fit and optimal control - An efficient data analysis for cancer research.Computational and structural biotechnology journal · 2024Article
- A seven-step guide to spatial, agent-based modelling of tumour evolution.Evolutionary applications · 2024Review
- Quantifying collective motion patterns in mesenchymal cell populations using topological data analysis and agent-based modeling.Mathematical biosciences · 2024Article
- Impact of Resistance on Therapeutic Design: A Moran Model of Cancer Growth.Bulletin of mathematical biology · 2024Article
- The role of recognition error in the stability of green-beard genes.Evolution letters · 2023Article
- COVID-19 vaccine incentive scheduling using an optimally controlled reinforcement learning model.Physica D. Nonlinear phenomena · 2023Article
- Abiraterone-Docetaxel scheduling for metastatic castration-resistant prostate cancer based on evolutionary dynamics.PloS one · 2023Article
- Are Adaptive Chemotherapy Schedules Robust? A Three-Strategy Stochastic Evolutionary Game Theory Model.Cancers · 2021Article
- Learning differential equation models from stochastic agent-based model simulations.Journal of the Royal Society, Interface · 2021Article
- Cancer cell population growth kinetics at low densities deviate from the exponential growth model and suggest an Allee effect.PLoS biology · 2019Article
- Cellular interactions constrain tumor growth.Proceedings of the National Academy of Sciences of the United States of America · 2019Article
- Nonlinear adaptive control of competitive release and chemotherapeutic resistance.Physical review. E · 2019Article
- Capitalizing on competition: An evolutionary model of competitive release in metastatic castration resistant prostate cancer treatment.Journal of theoretical biology · 2018Article
- Chemotherapeutic Dose Scheduling Based on Tumor Growth Rates Provides a Case for Low-Dose Metronomic High-Entropy Therapies.Cancer research · 2017Article
- The prisoner's dilemma as a cancer model.Convergent science physical oncology · 2016Article
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4 authors.
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Abstract
We describe a cell-molecular based evolutionary mathematical model of tumor development driven by a stochastic Moran birth-death process. The cells in the tumor carry molecular information in the form of a numerical genome which we represent as a four-digit binary string used to differentiate cells into 16 molecular types. The binary string is able to undergo stochastic point mutations that are passed to a daughter cell after each birth event. The value of the binary string determines the cell fitness, with lower fit cells (e.g. 0000) defined as healthy phenotypes, and higher fit cells (e.g. 1111) defined as malignant phenotypes. At each step of the birth-death process, the two phenotypic sub-populations compete in a prisoner's dilemma evolutionary game with the healthy cells playing the role of cooperators, and the cancer cells playing the role of defectors. Fitness, birth-death rates of the cell populations, and overall tumor fitness are defined via the prisoner's dilemma payoff matrix. Mutation parameters include passenger mutations (mutations conferring no fitness advantage) and driver mutations (mutations which increase cell fitness). The model is used to explore key emergent features associated with tumor development, including tumor growth rates as it relates to intratumor molecular heterogeneity. The tumor growth equation states that the growth rate is proportional to the logarithm of cellular diversity/heterogeneity. The Shannon entropy from information theory is used as a quantitative measure of heterogeneity and tumor complexity based on the distribution of the 4-digit binary sequences produced by the cell population. To track the development of heterogeneity from an initial population of healthy cells (0000), we use dynamic phylogenetic trees which show clonal and sub-clonal expansions of cancer cell sub-populations from an initial malignant cell. We show tumor growth rates are not constant throughout tumor development, and are generally much higher in the subclinical range than in later stages of development, which leads to a Gompertzian growth curve. We explain the early exponential growth of the tumor and the later saturation associated with the Gompertzian curve which results from our evolutionary simulations using simple statistical mechanics principles related to the degree of functional coupling of the cell states. We then compare dosing strategies at early stage development, mid-stage (clinical stage), and late stage development of the tumor. If used early during tumor development in the subclinical stage, well before the cancer cell population is selected for growth, therapy is most effective at disrupting key emergent features of tumor development.
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