Evidence map›Paper›PMID 29937405›Full record

ArticleCell chemical biology2018

Resistance to Enediyne Antitumor Antibiotics by Sequestration.

Chin-Yuan Chang, Xiaohui Yan, Ivana Crnovcic, Thibault Annaval, Changsoo Chang, Boguslaw Nocek, Jeffrey D Rudolf, Dong Yang, Hindra, Gyorgy Babnigg and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Genome mining for new enediyne antibiotics.Current opinion in chemical biology · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Characterization of TnmH as anJournal of medicinal chemistry · 2020
    Article
  10. Article
  11. Article
  12. Review
  13. Crossroads of Antibiotic Resistance and Biosynthesis.Journal of molecular biology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Chin-Yuan ChangDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Xiaohui YanDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Ivana CrnovcicDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Thibault AnnavalDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Changsoo ChangStructural Biology Center, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA; Midwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA.
Boguslaw NocekStructural Biology Center, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA; Midwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA.
Jeffrey D RudolfDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Dong YangDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
HindraDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA.
Gyorgy BabniggMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA; Center for Structural Genomics of Infectious Diseases, University of Chicago, Chicago, IL 60637, USA.
Andrzej JoachimiakStructural Biology Center, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA; Midwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA; Center for Structural Genomics of Infectious Diseases, University of Chicago, Chicago, IL 60637, USA.
George N PhillipsBioSciences at Rice and Department of Chemistry, Rice University, Houston, TX 77251, USA.
Ben ShenDepartment of Chemistry, The Scripps Research Institute, Jupiter, FL 33458, USA; Department of Molecular Medicine, The Scripps Research Institute, Jupiter, FL 33458, USA; Natural Products Library Initiative at The Scripps Research Institute, The Scripps Research Institute, Jupiter, FL 33458, USA. Electronic address: shenb@scripps.edu.
Scripps Research Institute · USArgonne National Laboratory · USRice University · US

Funding

Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI ORENGO, CHRISTINE · 2010 to 2014
$33.7M
Novel Enediyne-Based Antibody-Drug Conjugates for CancersR01CA204484 · NCI · UNIVERSITY OF FLORIDA · PI Natarajan Muthusamy, Ben Shen · 2017 to 2026
$4.6M
Enediyne Biosynthesis and EngineeringR01CA078747 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI SHEN, BEN · 1999 to 2015
$3.4M
Enzyme Discovery for Natural Product BiosynthesisU01GM098248 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PHILLIPS, GEORGE NEAL · 2011 to 2015
$2.8M
Genome Mining for Enediyne Natural Products from ActinomycetalsR01GM115575 · NIGMS · SCRIPPS FLORIDA · PI SHEN, BEN · 2016 to 2019
$1.9M
Rigidity and flexibility of large bio-molecular assembliesR01GM109456 · NIGMS · SMITH COLLEGE · PI STREINU, ILEANA · 2013 to 2017
$1.4M
NCI NIH HHS R01 CA078747NCI NIH HHS R01 CA204484NIGMS NIH HHS R01 GM109456NIGMS NIH HHS R01 GM115575NIGMS NIH HHS U01 GM098248NIGMS NIH HHS U54 GM094585
6 · The paper itself

Abstract

The enediynes, microbial natural products with extraordinary cytotoxicities, have been translated into clinical drugs. Two self-resistance mechanisms are known in the enediyne producers-apoproteins for the nine-membered enediynes and self-sacrifice proteins for the ten-membered enediyne calicheamicin. Here we show that: (1) tnmS1, tnmS2, and tnmS3 encode tiancimycin (TNM) resistance in its producer Streptomyces sp. CB03234, (2) tnmS1, tnmS2, and tnmS3 homologs are found in all anthraquinone-fused enediyne producers, (3) TnmS1, TnmS2, and TnmS3 share a similar β barrel-like structure, bind TNMs with nanomolar K

Indexed as

AnthraquinonesAntibiotics, AntineoplasticDrug Resistance, BacterialEnediynesGenes, BacterialHumansModels, MolecularMultigene FamilyStreptomycesAnthraquinonesAntibiotics, AntineoplasticEnediynesanthraquinone-fused enediyneantibody-drug conjugateanticancer drugbiosynthesisenediyneresistancesequence similarity networksequestrationthe human microbiometiancimycin

Identifiers

PMID29937405
PMCPMC6208323
OpenAlexW2808969991

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.