Evidence map›Paper›PMID 29937052›Full record

ArticleSystematic and applied microbiology2018

Polyphasic characterization of four soil-derived phenanthrene-degrading Acidovorax strains and proposal of Acidovorax carolinensis sp. nov.

David R Singleton, Janice Lee, Allison N Dickey, Aaron Stroud, Elizabeth H Scholl, Fred A Wright, Michael D Aitken

Abstract read
In one paragraph

Article in Systematic and applied microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Heliyon · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

David R SingletonDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC 27599-7431, USA. Electronic address: david.r.singleton@duke.edu.
Janice LeeDepartment of Biology, University of North Carolina,Chapel Hill, NC, 27599-3280, USA.
Allison N DickeyBioinformatics Research Center, North Carolina State University, Raleigh, NC, USA.
Aaron StroudDepartment of Biology, University of North Carolina,Chapel Hill, NC, 27599-3280, USA.
Elizabeth H SchollBioinformatics Research Center, North Carolina State University, Raleigh, NC, USA.
Fred A WrightBioinformatics Research Center, North Carolina State University, Raleigh, NC, USA.
Michael D AitkenDepartment of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC 27599-7431, USA.
University of North Carolina at Chapel Hill · USNorth Carolina State University · US

Funding

STOCHASTIC ANALYSIS OF FLOW AND TRANSPORT PHENOMENAP42ES005948 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FRY, REBECCA · 1992 to 2017
$45.4M
NIEHS NIH HHS P42 ES005948
6 · The paper itself

Abstract

Four bacterial strains identified as members of the Acidovorax genus were isolated from two geographically distinct but similarly contaminated soils in North Carolina, USA, characterized, and their genomes sequenced. Their 16S rRNA genes were highly similar to those previously recovered during stable-isotope probing (SIP) of one of the soils with the polycyclic aromatic hydrocarbon (PAH) phenanthrene. Heterotrophic growth of all strains occurred with a number of organic acids, as well as phenanthrene, but no other tested PAHs. Optimal growth occurred aerobically under mesophilic temperature, neutral pH, and low salinity conditions. Predominant fatty acids were C

Indexed as

PhylogenySoil MicrobiologyBiodegradation, EnvironmentalComamonadaceaeDNA, BacterialGenes, BacterialGenome, BacterialMetabolic Networks and PathwaysNorth CarolinaPhenanthrenesRNA, Ribosomal, 16SSequence Analysis, DNASoil PollutantsDNA, BacterialphenanthrenePhenanthrenesRNA, Ribosomal, 16SSoil PollutantsAcidovoraxPhenanthrenePolycyclic aromatic hydrocarbons

Identifiers

PMID29937052
PMCPMC6361392
OpenAlexW2805825320

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.