Evidence map›Paper›PMID 29933435›Full record

ReviewFEMS microbiology ecology2018

Acetylenotrophy: a hidden but ubiquitous microbial metabolism?

Denise M Akob, John M Sutton, Janna L Fierst, Karl B Haase, Shaun Baesman, George W Luther, Laurence G Miller, Ronald S Oremland

Open access · bronzeAbstract readReview
In one paragraph

Review in FEMS microbiology ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Acetylenotrophic and DiazotrophicApplied and environmental microbiology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. International journal of systematic and evolutionary microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Denise M AkobU. S. Geological Survey, 12201 Sunrise Valley Dr, MS 430, Reston, VA 20192 USA.
John M SuttonDepartment of Biological Sciences, The University of Alabama, SEC 2328, Box 870344, Tuscaloosa, AL 35487 USA.
Janna L FierstDepartment of Biological Sciences, The University of Alabama, SEC 2328, Box 870344, Tuscaloosa, AL 35487 USA.
Karl B HaaseU. S. Geological Survey, 12201 Sunrise Valley Dr, MS 430, Reston, VA 20192 USA.
Shaun BaesmanU. S. Geological Survey, 345 Middlefield Road, MS 480, Menlo Park, CA 94025 USA.
George W LutherSchool of Marine Science and Policy, University of Delaware, 700 Pilottown Road, Cannon Laboratory 218, Lewes, DE 19958, USA.
Laurence G MillerU. S. Geological Survey, 345 Middlefield Road, MS 480, Menlo Park, CA 94025 USA.
Ronald S OremlandU. S. Geological Survey, 345 Middlefield Road, MS 480, Menlo Park, CA 94025 USA.
United States Geological Survey · USUniversity of Alabama · USUniversity of Delaware · US

Funding

Systems genetics of natural variation in stress response pathwaysR01GM102511 · NIGMS · UNIVERSITY OF OREGON · PI PHILLIPS, PATRICK C. · 2015 to 2018
$1.1M
NIGMS NIH HHS R01 GM102511
6 · The paper itself

Abstract

Acetylene (IUPAC name: ethyne) is a colorless, gaseous hydrocarbon, composed of two triple bonded carbon atoms attached to hydrogens (C2H2). When microbiologists and biogeochemists think of acetylene, they immediately think of its use as an inhibitory compound of certain microbial processes and a tracer for nitrogen fixation. However, what is less widely known is that anaerobic and aerobic microorganisms can degrade acetylene, using it as a sole carbon and energy source and providing the basis of a microbial food web. Here, we review what is known about acetylene degrading organisms and introduce the term 'acetylenotrophs' to refer to the microorganisms that carry out this metabolic pathway. In addition, we review the known environmental sources of acetylene and postulate the presence of an hidden acetylene cycle. The abundance of bacteria capable of using acetylene and other alkynes as an energy and carbon source suggests that there are energy cycles present in the environment that are driven by acetylene and alkyne production and consumption that are isolated from atmospheric exchange. Acetylenotrophs may have developed to leverage the relatively high concentrations of acetylene in the pre-Cambrian atmosphere, evolving later to survive in specialized niches where acetylene and other alkynes were produced.

Indexed as

AcetyleneAtmosphereBacteriaCarbonEnergy MetabolismAcetyleneCarbon

Identifiers

PMID29933435
PMCPMC7190893
OpenAlexW2805906850

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.