Evidence map›Paper›PMID 29933138›Full record

ArticleJournal of plant physiology2018

Copper excess reduces nitrate uptake by Arabidopsis roots with specific effects on gene expression.

Franz W R Hippler, Dirceu Mattos-Jr, Rodrigo M Boaretto, Lorraine E Williams

Open access · hybridAbstract read
In one paragraph

Article in Journal of plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Advances in viticultureFrontiers in plant science · 2024
    Article
  4. Review
  5. Physiological and Molecular Mechanisms of Plant Responses to Copper Stress.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Franz W R HipplerCentro de Citricultura Sylvio Moreira, Instituto Agronômico (IAC), Rod. Anhanguera, km 158, CP 04, CEP 13490-970, Cordeirópolis, SP, Brazil; University of Southampton, Biological Sciences, Building 85, Highfield, Southampton SO17 1BJ, United Kingdom. Electronic address: franz@ccsm.br.
Dirceu Mattos-JrCentro de Citricultura Sylvio Moreira, Instituto Agronômico (IAC), Rod. Anhanguera, km 158, CP 04, CEP 13490-970, Cordeirópolis, SP, Brazil.
Rodrigo M BoarettoCentro de Citricultura Sylvio Moreira, Instituto Agronômico (IAC), Rod. Anhanguera, km 158, CP 04, CEP 13490-970, Cordeirópolis, SP, Brazil.
Lorraine E WilliamsUniversity of Southampton, Biological Sciences, Building 85, Highfield, Southampton SO17 1BJ, United Kingdom. Electronic address: lew@soton.ac.uk.
Agronomical Institute of Campinas · BRUniversity of Southampton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrate uptake by plants is mediated by specific transport proteins in roots (NRTs), which are also dependent on the activity of proton pumps that energize the reaction. Nitrogen (N) metabolism in plants is sensitive to copper (Cu) toxicity conditions. To understand how Cu affects the uptake and assimilation processes, this study assesses the inhibitory effects of elevated Cu levels on the expression of genes related to N absorption, transport and assimilation in roots of Arabidopsis. Plants were grown hydroponically for 45 days, being exposed to a range of Cu concentrations in the last 72 h or alternatively exposed to 5.0 μM Cu for the last 15 days. High Cu levels decreased the uptake and accumulation of N in plants. It down-regulated the expression of genes encoding nitrate reductase (NR1), low-affinity nitrate transporters (NRT1 family) and bZIP transcription factors (TGA1 and TGA4) that regulate the expression of nitrate transporters. Cu toxicity also specifically down-regulated the plasma membrane proton pump, AHA2, whilst having little effect on AHA1 and AHA5. In contrast, there was an up-regulation of high-affinity nitrate transporters from the NRT2 family when exposed to medium level of Cu excess, but this was insufficient for restoring N absorption by roots to control levels. These results demonstrate that plants display specific responses to Cu toxicity, modulating the expression of particular genes related to nitrate uptake, such as low-affinity nitrate transporters and proton pumps.

Indexed as

Anion Transport ProteinsArabidopsisBasic-Leucine Zipper Transcription FactorsCopperNitrate ReductaseNitratesNitrate TransportersProton PumpsAnion Transport ProteinsBasic-Leucine Zipper Transcription FactorsCopperNitrate ReductaseNitratesNitrate TransportersProton PumpsMetal toxicityNitrate transporterNutrient uptakeProton pump

Identifiers

PMID29933138
PMCPMC6090090
OpenAlexW2807876794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.