Evidence map›Paper›PMID 29932423›Full record

ArticleeLife2018

Synergistic assembly of human pre-spliceosomes across introns and exons.

Joerg E Braun, Larry J Friedman, Jeff Gelles, Melissa J Moore

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Condensation of ZFP207 and U1 snRNP promotes spliceosome assembly.Nature structural & molecular biology · 2025
    Article
  3. Article
  4. Review
  5. Review
  6. Article
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  8. Review
  9. Article
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  11. Dynamics of RNA polymerase II and elongation factor Spt4/5 recruitment during activator-dependent transcription.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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  13. Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Joerg E BraunRNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, United States.ORCID http://orcid.org/0000-0002-8309-6401
Larry J FriedmanDepartment of Biochemistry, Brandeis University, Waltham, United States.ORCID http://orcid.org/0000-0003-4946-8731
Jeff GellesDepartment of Biochemistry, Brandeis University, Waltham, United States.ORCID http://orcid.org/0000-0001-7910-3421
Melissa J MooreRNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, United States.
Brandeis University · USUniversity of Massachusetts Chan Medical School · US

Funding

Single-molecule visualization of transcription regulation mechanismsR01GM081648 · NIGMS · BRANDEIS UNIVERSITY · PI JEFF GELLES · 2007 to 2026
$7.4M
The second step of pre-mRNA splicingR01GM053007 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MOORE, MELISSA J. · 1995 to 2018
$5.6M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM053007NIGMS NIH HHS R01 GM081648NIH HHS R01 GM053007NIH HHS R01 GM081648
6 · The paper itself

Abstract

Most human genes contain multiple introns, necessitating mechanisms to effectively define exons and ensure their proper connection by spliceosomes. Human spliceosome assembly involves both cross-intron and cross-exon interactions, but how these work together is unclear. We examined in human nuclear extracts dynamic interactions of single pre-mRNA molecules with individual fluorescently tagged spliceosomal subcomplexes to investigate how cross-intron and cross-exon processes jointly promote pre-spliceosome assembly. U1 subcomplex bound to the 5' splice site of an intron acts jointly with U1 bound to the 5' splice site of the next intron to dramatically increase the rate and efficiency by which U2 subcomplex is recruited to the branch site/3' splice site of the upstream intron. The flanking 5' splice sites have greater than additive effects implying distinct mechanisms facilitating U2 recruitment. This synergy of 5' splice sites across introns and exons is likely important in promoting correct and efficient splicing of multi-intron pre-mRNAs.

Indexed as

ExonsIntronsRNA SplicingAdenosine TriphosphateComputational BiologyHEK293 CellsHumansRibonucleoproteins, Small NuclearRNA PrecursorsRNA Splice SitesSpliceosomesAdenosine TriphosphateRibonucleoproteins, Small NuclearRNA PrecursorsRNA Splice Sitesbiochemistrychemical biologyCoSMoShumanmolecular biophysicsRNAsingle-moleculesnRNPspliceosomesplicingstructural biology

Identifiers

PMID29932423
PMCPMC6035042
OpenAlexW2808768506

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.