Evidence map›Paper›PMID 29931607›Full record

ArticleMarine biotechnology (New York, N.Y.)2018

Mapping Genetic Loci for Quantitative Traits of Golden Shell Color, Mineral Element Contents, and Growth-Related Traits in Pacific Oyster (Crassostrea gigas).

Junlin Song, Qi Li, Yong Yu, Sai Wan, Lichen Han, Shaojun Du

Abstract read
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Age-Dependent Growth-Related QTL Variations in Pacific Abalone,International journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Junlin SongKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Qi LiKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China. qili66@ouc.edu.cn.
Yong YuKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Sai WanKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Lichen HanKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Shaojun DuDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore, MD, USA.
Ocean University of China · CNQingdao Agricultural University · CNUniversity of Maryland, Baltimore · US

Funding

Industrial Development Project of Qingdao City 17-3-3-64-nshNational Natural Science Foundation of China 31772843the Fundamental Research Funds for the Central Universities 201762014
6 · The paper itself

Abstract

Golden shell color and mineral content are important economic traits of Pacific oyster (Crassostrea gigas). In this study, we mapped a series of quantitative trait loci (QTLs) that control zinc (Zn) and magnesium (Mg) content, shell color and growth performance to two sex-averaged linkage maps from the FAM-A and FAM-B families. In total, ten QTLs were identified in seven linkage groups (LGs) in the FAM-B family, and seven QTLs were identified in four linkage groups in the FAM-A family. Two QTLs affecting the trait of golden shell color were identified in LG8 of the FAM-A and LG10 of the FAM-B families, which could explain 20.2 and 10.5% of the phenotypic variations, respectively. Two QTLs for Zn content were identified that could contribute to 17.9 and 34.44% of the phenotypic variations in FAM-A. Six QTLs for Zn and Mg contents were identified in four LGs (LG1, LG2, LG5, and LG9) in FAM-B, which explained 13.5-26.7% of the phenotypic variations. In addition, seven QTLs related to oyster growth were recognized in both FAM-A and FAM-B families accounting for 14.6-36.7% of the phenotypic variations. All of the DNA markers in QTL regions were blasted and 14 genes associated with above traits were identified. The mRNA expression of these genes was determined by quantitative RT-PCR. These QTLs and candidate genes could be used as potential targets for marker-assisted selection in C. gigas breeding.

Indexed as

GenomeQuantitative Trait, HeritableQuantitative Trait LociAnimalsAnimal ShellsCations, DivalentChromosome MappingColorCrassostreaGene OntologyGenetic LinkageGenetic MarkersMagnesiumMicrosatellite RepeatsMineralsMolecular Sequence AnnotationCations, DivalentGenetic MarkersMagnesiumMineralsZincCrassostrea gigasMarker-assisted selectionQuantitative trait lociShell colorZinc and magnesium element

Identifiers

PMID29931607
OpenAlexW2809667018

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.