Evidence map›Paper›PMID 29930343›Full record

ArticleGene therapy2018

Stable and reproducible transgene expression independent of proliferative or differentiated state using BAC TG-EMBED.

Pankaj Chaturvedi, Binhui Zhao, David L Zimmerman, Andrew S Belmont

Abstract read
In one paragraph

Article in Gene therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The Regenerative Power of Stem Cells: Treating Bleomycin-Induced Lung Fibrosis.Stem cells and cloning : advances and applications · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Pankaj ChaturvediDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL, USA.
Binhui ZhaoDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL, USA.
David L ZimmermanDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL, USA.
Andrew S BelmontDepartment of Cell and Developmental Biology, University of Illinois, Urbana, IL, USA. asbel@illinois.edu.
University of Illinois Urbana-Champaign · US

Funding

Engineering stable, independent multi-transgene expression in mammalian cellsR01GM098319 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BELMONT, ANDREW STEVEN · 2011 to 2014
$1.1M
NIGMS NIH HHS R01 GM098319NIH HHS R01 GM098319
6 · The paper itself

Abstract

Reproducible and stable transgene expression is an important goal in both basic research and biotechnology, with each application demanding a range of transgene expression. Problems in achieving stable transgene expression include multi-copy transgene silencing, chromosome-position effects, and loss of expression during long-term culture, induced cell quiescence, and/or cell differentiation. Previously, we described the "BAC TG-EMBED" method for copy-number dependent, chromosome position-independent expression of embedded transgenes within a BAC containing ~170 kb of the mouse Dhfr locus. Here we demonstrate wider applicability of the method by identifying a BAC and promoter combination that drives reproducible, copy-number dependent, position-independent transgene expression even after induced quiescence and/or cell differentiation into multiple cell types. Using a GAPDH BAC containing ~200 kb of the human GAPDH gene locus and a 1.2 kb human UBC promoter, we achieved stable GFP-ZeoR reporter expression in mouse NIH 3T3 cells after low-serum-induced cell cycle arrest or differentiation into adipocytes. More notably, GFP-ZeoR expression remained stable and copy-number dependent even after differentiation of mouse ESCs into several distinct lineages. These results highlight the potential use of BAC TG-EMBED as an expression platform for high-level but stable, long-term expression of transgene independent of cell proliferative or differentiated state.

Indexed as

Chromosomes, Artificial, BacterialTransgenesAnimalsCell DifferentiationGenes, ReporterGenetic VectorsGene Transfer TechniquesGreen Fluorescent ProteinsHumansMiceNIH 3T3 CellsPromoter Regions, GeneticTetrahydrofolate DehydrogenaseTransfectionTransformation, GeneticGreen Fluorescent ProteinsTetrahydrofolate Dehydrogenase

Identifiers

PMID29930343
PMCPMC6195848
OpenAlexW2809192974

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.