Evidence map›Paper›PMID 29929489›Full record

ArticleBMC genomics2018

Quantitative evolutionary proteomics of seminal fluid from primates with different mating systems.

Katrina G Claw, Renee D George, Michael J MacCoss, Willie J Swanson

Abstract read
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Seminal fluid and accessory male investment in sperm competition.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Katrina G ClawDepartment of Pharmaceutics, University of Washington, Box 357610, Seattle, WA, 98195-7610, USA. kclaw@uw.edu.ORCID http://orcid.org/0000-0003-2239-5018
Renee D GeorgeHoward Hughes Medical Institute, Rady Children's Institute of Genomic Medicine, University of California, San Diego, CA, USA.
Michael J MacCossDepartment of Genome Sciences, University of Washington, 3720 15th Ave NE, Seattle, WA, 98195, USA.
Willie J SwansonDepartment of Genome Sciences, University of Washington, 3720 15th Ave NE, Seattle, WA, 98195, USA.

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
Population Genetics of Reproductive Protein DiversityR01HD042563 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2003 to 2010
$2.4M
Detailed functional analysis of gamete recognition protein interactionsR01HD076862 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2014 to 2018
$1.9M
Drosophila Seminal Fluid: Proteomic Discovery & Functional Variation AnalysesR01HD057974 · NICHD · UNIVERSITY OF WASHINGTON · PI SWANSON, WILLIE J · 2008 to 2012
$1.6M
National Institute of Child Health and Human Development HD076862National Institutes of Health HD042563National Institutes of Health HD057974National Science Foundation DEG-0718124NCRR NIH HHS P51 RR000165NICHD NIH HHS R01 HD042563NICHD NIH HHS R01 HD057974NICHD NIH HHS R01 HD076862
6 · The paper itself

Abstract

backgroundGenomic data from various organisms have been used to study how sexual selection has shaped genetic diversity in reproductive proteins, and in particular, to elucidate how mating systems may have influenced evolution at the molecular and phenotypic levels. However, large-scale proteomic data including protein identifications and abundances are only now entering the field of evolutionary and comparative genomics. Variation in both protein sequence and expression level may play important roles in the evolution of sexual traits and behaviors.

resultsHere, we broadly analyze the components of seminal fluid from primates with diverse mating systems ranging from monogamous to polygynous, and include genomics, proteomics, phylogenetic and quantitative characters into our framework. Our analyses show that seminal fluid proteins are undergoing rapid evolution and some of these quickly evolving proteins may be influenced by sexual selection. Through evolutionary analyses and protein abundance differences, we identified 84 genes whose evolutionary rates or expression levels were correlated with mating system and other sexual characters. We found that many proteins differ in abundance between monogamous and polygynous primate mating systems. Many of these proteins are enriched in the copulatory plug pathway, which suggests that post-zygotic selective barriers are important regardless of mating system type.

conclusionsThis work is the first to comprehensively compare seminal fluid proteins between human and non-human primates using high-throughput proteomics. Our findings highlight the impact of mating system variation on seminal fluid protein evolution and abundance.

Indexed as

Evolution, MolecularAnimalsChromatography, LiquidGenomicsMaleMass SpectrometryPhylogenyPrimatesProteomicsReproductionSemenTandem Mass SpectrometryMating systemsPrimate and non-human primate evolutionProteomicsRapid evolutionReproductionSeminal fluid proteinsSexual selection

Identifiers

PMID29929489
PMCPMC6014011

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.