Evidence map›Paper›PMID 29927954›Full record

ArticlePloS one2018

Genetic variation and population structure of Diaphorina citri using cytochrome oxidase I sequencing.

A Fuentes, W E Braswell, R Ruiz-Arce, A Racelis

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In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

A FuentesDepartment of Biology, University of Texas Rio Grande Valley, Edinburg, TX, United States of America.ORCID 0000-0003-0958-9432
W E BraswellUSDA APHIS CPHST Mission Lab, Edinburg, TX, United States of America.
R Ruiz-ArceUSDA APHIS CPHST Mission Lab, Edinburg, TX, United States of America.
A RacelisDepartment of Biology, University of Texas Rio Grande Valley, Edinburg, TX, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrus greening disease, or huanglongbing (HLB), is currently one of the most devastating diseases of citrus. The bacteria thought to be responsible for the disease, Candidatus Liberibacter asiaticus impact the majority of commercial citrus species worldwide. These bacteria are transmitted by the Asian citrus psyllid (ACP), Diaphorina citri Kuwayama, which is now found in most citrus growing regions. With no known cure, ACP-vectored HLB is responsible for significant economic losses to the global citrus industry. A better understanding of the global genetic diversity of D. citri would improve current and future pest management and mitigation programs. To assess the genetic diversity of D. citri in worldwide collections, a total of 1,108 sequences belonging to ACP gathered from 27 countries in the Americas, the Caribbean, Southeast and Southwest Asia were examined for the study. 883 D. citri came from 98 locations in 18 different countries, and were sequenced using a 678bp fragment of the mitochondrial cytochrome oxidase I (COI) gene. Additionally, 225 previously-reported D. citri COI sequences, were also included in our analysis. Analyses revealed 28 haplotypes and a low genetic diversity. This is in accordance with previous reports on the little diversity of D. citri in worldwide populations. Our analyses reveal population structure with 21 haplotypes showing geographic association, increasing the resolution for the source estimation of ACP. This study reveals the distribution of haplotypes observed in different geographic regions and likely geographic sources for D. citri introductions.

Indexed as

Genetic VariationAmericasAnimalsAsiaCaribbean RegionCitrusDemographyDisease VectorsElectron Transport Complex IVEvolution, MolecularGenetics, PopulationHaplotypesHemipteraInsect ProteinsPhylogeographySequence Analysis, DNAElectron Transport Complex IVInsect Proteins

Identifiers

PMID29927954
PMCPMC6013106

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.