Evidence map›Paper›PMID 29927001›Full record

ArticleJournal of clinical laboratory analysis2018

Significant association of PRMT6 hypomethylation with colorectal cancer.

Ranran Pan, Hang Yu, Jie Dai, Cong Zhou, Xiuru Ying, Jie Zhong, Jun Zhao, Yihan Zhang, Boyi Wu, Yiyi Mao and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Cellular consequences of arginine methylation.Cellular and molecular life sciences : CMLS · 2019
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Ranran PanMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Hang YuMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Jie DaiMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Cong ZhouMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Xiuru YingMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Jie ZhongMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Jun ZhaoMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Yihan ZhangMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Boyi WuMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Yiyi MaoMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Dongping WuDepartment of Medical Oncology, Shaoxing People's Hospital, Shaoxing Hospital of Zhejiang University, Ningbo, Zhejiang, China.
Jieer YingDepartment of Medical Oncology, Zhejiang Cancer Hospital, Hangzhou, Zhejiang, China.
Shiwei DuanMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.ORCID http://orcid.org/0000-0001-7682-2877
Ningbo University · CNShaoxing People's Hospital · CNZhejiang Cancer Hospital · CN

Funding

K. C. Wong Magna Fund
6 · The paper itself

Abstract

backgroundProtein arginine N-methyltransferase 6 (PRMT6) was deemed to be indispensable in the variety of biological processes. Upregulated PRMT6 was found in various human diseases including cancer. Herein, we investigated the performance of PRMT6 methylation in the diagnosis for CRC.

methodsA quantitative methylation-specific polymerase chain reaction (qMSP) method was used to measure PRMT6 promoter methylation. The percentage of methylated reference (PMR) was applied to represent gene methylation level.

resultsOur data indicated that PRMT6 promoter methylation levels were significantly lower in CRC tissues than those in paired nontumor tissues (median PMR: 36.93% vs 63.12%, P = 1E-6) and normal intestinal tissues (median PMR: 36.93% vs 506.55%, P = 8E-12). We further examined the potential role of PRMT6 hypomethylation by the receiver operating characteristic (ROC) curve. Our results showed that the area under the curve (AUC) was 0.644 (95% CI = 0.596-0.733) between CRC tissues and paired nontumor tissues, 0.958 (95% CI = 0.919-0.998) between CRC tissues and normal intestinal tissues, and 0.899 (95% CI = 0.825-0.972) between paired nontumor tissues and normal intestinal tissues.

conclusionOur study firstly indicated that the hypomethylation of PRMT6 promoter could be a novel diagnostic biomarker for CRC.

Indexed as

AgedAge FactorsColorectal NeoplasmsDatasets as TopicDNA MethylationFemaleGene Expression Regulation, NeoplasticGenetic Association StudiesHumansMaleMiddle AgedNuclear ProteinsPromoter Regions, GeneticProtein-Arginine N-MethyltransferasesROC CurveNuclear ProteinsPRMT6 protein, humanProtein-Arginine N-Methyltransferasescolorectal cancerDNA methylationprotein arginine N-methyltransferase 6quantitative methylation-specific polymerase chain reaction

Identifiers

PMID29927001
PMCPMC6816985
OpenAlexW2809180024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.