Evidence map›Paper›PMID 29926536›Full record

ArticleMicrobiologyOpen2019

Copper stress response in yeast Rhodotorula mucilaginosa AN5 isolated from sea ice, Antarctic.

Guangfeng Kan, Xiaofei Wang, Jie Jiang, Chengsheng Zhang, Minglei Chi, Yun Ju, Cuijuan Shi

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 47 citations in OpenAlex.

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  12. Metabolomics reveals the mechanism of Antarctic yeast Rhodotorula mucliaginosa AN5 to cope with cadmium stress.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Guangfeng KanSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.ORCID 0000-0002-5357-7204
Xiaofei WangSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.
Jie JiangSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.
Chengsheng ZhangTobacco Integrated Pest Management of China Tobacco, Tobacco Research Institute of Chinese Academy of Agricultural Science, Qingdao, China.
Minglei ChiSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.
Yun JuSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.
Cuijuan ShiSchool of Marine Science and Technology, Harbin Institute of Technology at Weihai, Weihai, China.
Harbin Institute of Technology · CNChina Tobacco · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heavy metal pollution in Antarctic is serious by anthropogenic emissions and atmospheric transport. To dissect the heavy metal adaptation mechanisms of sea-ice organisms, a basidiomycetous yeast strain AN5 was isolated and its cellular changes were analyzed. Morphological, physiological, and biochemical characterization indicated that this yeast strain belonged to Rhodotorula mucilaginosa AN5. Heavy metal resistance pattern of Cd > Pb = Mn > Cu > Cr > Hg was observed. Scanning electron microscopic (SEM) results exhibited altered cell surface morphology under the influence of copper metal compared to that with control. The determination of physiological and biochemical changes manifested that progressive copper treatment significantly increased antioxidative reagents content and enzymes activity in the red yeast, which quench the active oxygen species to maintain the intercellular balance of redox state and ensure the cellular fission and growth. Comparative proteomic analysis revealed that, under 2 mM copper stress, 95 protein spots were tested reproducible changes of at least 10-fold in cells. Among 95 protein spots, 43 were elevated and 52 were decreased synthesis. After MALDI TOF MS/MS analysis, 51 differentially expressed proteins were identified successfully and classified into six functional groups, including carbohydrate and energy metabolism, nucleotide and protein metabolism, protein folding, antioxidant system, signaling, and unknown function proteins. Function analysis indicated that carbohydrate and energy metabolism-, nucleotide and protein metabolism-, and protein folding-related proteins played central role to the heavy metal resistance of Antarctic yeast. Generally, the results revealed that the yeast has a great capability to cope with heavy metal stress and activate the physiological and protein mechanisms, which allow more efficient recovery after copper stress. Our studies increase understanding of the molecular resistance mechanism of polar yeast to heavy metal, which will be benefitted for the sea-ice isolates to be a potential candidate for bioremediation of metal-contaminated environments.

Indexed as

Stress, PhysiologicalAntarctic RegionsAntioxidantsCopperDrug Resistance, FungalIce CoverMicroscopy, Electron, ScanningOxidation-ReductionProteomeRhodotorulaSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSurface PropertiesTrace ElementsAntioxidantsCopperProteomeTrace Elementsadaptive responsesAntarctica yeastcopper stressproteomics

Identifiers

PMID29926536
PMCPMC6436437
OpenAlexW2809169678

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.