Evidence map›Paper›PMID 29925238›Full record

ArticleJournal of proteome research2018

Quantitative Top-Down Mass Spectrometry Identifies Proteoforms Differentially Released during Mechanical Stimulation of Mouse Skin.

Francie Moehring, Matthew Waas, Theodore R Keppel, Deepali Rathore, Ashley M Cowie, Cheryl L Stucky, Rebekah L Gundry

Abstract read
In one paragraph

Article in Journal of proteome research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Francie MoehringDepartment of Cell Biology, Neurobiology, and Anatomy , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Matthew WaasDepartment of Biochemistry , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Theodore R KeppelDepartment of Biochemistry , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Deepali RathoreCenter for Biomedical Mass Spectrometry Research , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Ashley M CowieDepartment of Cell Biology, Neurobiology, and Anatomy , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Cheryl L StuckyDepartment of Cell Biology, Neurobiology, and Anatomy , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.
Rebekah L GundryDepartment of Biochemistry , Medical College of Wisconsin , Milwaukee , Wisconsin 53226 , United States.ORCID 0000-0002-9263-833X

Funding

TR&D 7: Cell Specific ProteomicsP41GM108569 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2015 to 2024
$13.6M
Nociceptive Mechanisms Underlying Sickle Cell PainR01NS070711 · NINDS · MEDICAL COLLEGE OF WISCONSIN · PI Bonnie N Dittel, Cheryl Louise Stucky · 2009 to 2026
$8.7M
FUNCTIONAL ANALYSIS OF DISTINCT NOCICEPTOR POPULATIONSR01NS040538 · NINDS · MEDICAL COLLEGE OF WISCONSIN · PI STUCKY, CHERYL LOUISE · 2000 to 2019
$6.2M
Cell Surface Phenotyping Human Primary CellsR01HL134010 · NHLBI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI GUNDRY, REBEKAH L. · 2016 to 2020
$1.9M
Cell Surface Proteins in Human CardiomyocytesR01HL126785 · NHLBI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI GUNDRY, REBEKAH L. · 2016 to 2019
$1.5M
Investigating the Utility and Function of a Novel Cardiomyocyte Cell Surface ProteinF31HL140914 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI WAAS, MATTHEW R. · 2018 to 2019
$70k
NHLBI NIH HHS F31 HL140914NHLBI NIH HHS R01 HL126785NHLBI NIH HHS R01 HL134010NIGMS NIH HHS P41 GM108569NINDS NIH HHS R01 NS040538NINDS NIH HHS R01 NS070711
6 · The paper itself

Abstract

Mechanotransduction refers to the processes whereby mechanical stimuli are converted into electrochemical signals that allow for the sensation of our surrounding environment through touch. Despite its fundamental role in our daily lives, the molecular and cellular mechanisms of mechanotransduction are not yet well-defined. Previous data suggest that keratinocytes may release factors that activate or modulate cutaneous sensory neuron terminals, including small molecules, lipids, peptides, proteins, and oligosaccharides. This study presents a first step toward identifying soluble mediators of keratinocyte-sensory neuron communication by evaluating the potential for top-down mass spectrometry to identify proteoforms released during 1 min of mechanical stimulation of mouse skin from naı̈ve animals. Overall, this study identified 47 proteoforms in the secretome of mouse hind paw skin, of which 14 were differentially released during mechanical stimulation, and includes proteins with known and previously unknown relevance to mechanotransduction. Finally, this study outlines a bioinformatic workflow that merges output from two complementary analysis platforms for top-down data and demonstrates the utility of this workflow for integrating quantitative and qualitative data.

Indexed as

Mechanotransduction, CellularAnimalsComputational BiologyKeratinocytesMass SpectrometryMiceProteinsProteomicsSkinWorkflowProteinskeratinocyteslabel-free quantitationmechanotransductionnociceptorprimary afferentproteoformssensory neurontop-down proteomicstouch

Identifiers

PMID29925238
PMCPMC6195672

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.