ArticleFrontiers in microbiology2018
Dissecting Community Structure in Wild Blueberry Root and Soil Microbiome.
Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 96 citations in OpenAlex.
- High-Resolution Community Profiling of Active Bacteria and Eukaryotes in Replant-Diseased Blueberry Farm Soils From New Jersey, USA.Environmental microbiology · 2026Article
- PICRUSt2-SC: an update to the reference database used for functional prediction within PICRUSt2.Bioinformatics (Oxford, England) · 2025Article
- Temporal dynamics and tissue-specific variations of the blueberry phyllosphere mycobiome.Horticulture research · 2025Article
- Dynamics of fungal endophytic communities in bilberry (Vaccinium myrtillus L.) fruits through development is shaped by host phenolic compounds.FEMS microbiology ecology · 2025Article
- Improving the profiling of wheat bacterial and fungal endophytic communities-a PCR clamping approach.Frontiers in microbiology · 2025Article
- The rhizosphere and root selections intensify fungi-bacteria interaction in abiotic stress-resistant plants.PeerJ · 2024Article
- Microbiome specificity and fluxes between two distant plant taxa in Iberian forests.Environmental microbiome · 2023Article
- Root Niches of Blueberry Imprint Increasing Bacterial-Fungal Interkingdom Interactions along the Soil-Rhizosphere-Root Continuum.Microbiology spectrum · 2023Article
- Apple Root Microbiome as Indicator of Plant Adaptation to Apple Replant Diseased Soils.Microorganisms · 2023Article
- Prokaryotic communities adapted to microhabitats on the Indian lotus (Nelumbo nucifera) growing in the high-altitude urban Dal Lake.International microbiology : the official journal of the Spanish Society for Microbiology · 2023Article
- The root enrichment of bacteria is consistent across different stress-resistant plant species.PeerJ · 2023Article
- Article
- From recreational to income-generating opportunities: assessment of public preferences for non-wood forest products in the Czech Republic.Frontiers in nutrition · 2023Article
- Analysis of Blueberry Plant Rhizosphere Bacterial Diversity and Selection of Plant Growth Promoting Rhizobacteria.Current microbiology · 2022Article
- Metabarcoding of fungal assemblages in Vaccinium myrtillus endosphere suggests colonization of above-ground organs by some ericoid mycorrhizal and DSE fungi.Scientific reports · 2022Article
- Fungal-Bacterial Networks in the Habitat of SongRong (Journal of fungi (Basel, Switzerland) · 2022Article
- The Rhizosphere Microbiomes of Five Species of Coffee Trees.Microbiology spectrum · 2022Article
- The Evaluation of Bacterial Abundance and Functional Potentials in the Three Major Watersheds, Located in the Hot Spring Zone of the Tatun Volcano Group Basin, Taiwan.Microorganisms · 2022Article
- Article
- Response of Plant-Associated Microbiome to Plant Root Colonization by Exogenous Bacterial Endophyte in Perennial Crops.Frontiers in microbiology · 2022Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A complex network of functions and symbiotic interactions between a eukaryotic host and its microbiome is a the foundation of the ecological unit holobiont. However, little is known about how the non-fungal eukaryotic microorganisms fit in this complex network of host-microbiome interactions. In this study, we employed a unique wild blueberry ecosystem to evaluate plant-associated microbiota, encompassing both eukaryotic and bacterial communities. We found that, while soil microbiome serves as a foundation for root microbiome, plant-influenced species sorting had stronger effect on eukaryotes than on bacteria. Our study identified several fungal and protist taxa, which are correlated with decreased fruit production in wild blueberry agricultural ecosystems. The specific effect of species sorting in root microbiome resulted in an increase in relative abundance of fungi adapted to plant-associated life-style, while the relative abundance of non-fungal eukaryotes was decreased along the soil-endosphere continuum in the root, probably because of low adaptation of these microorganisms to host-plant defense responses. Analysis of community correlation networks indicated that bacterial and eukaryotic interactions became more complex along the soil-endosphere continuum and, in addition to extensive mutualistic interactions, co-exclusion also played an important role in shaping wild blueberry associated microbiome. Our study identified several potential hub taxa with important roles in soil fertility and/or plant-microbe interaction, suggesting the key role of these taxa in the interconnection between soils and plant health and overall microbial community structure. This study also provides a comprehensive view of the role of non-fungal eukaryotes in soil ecosystem.
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