Evidence map›Paper›PMID 29920568›Full record

ArticlePloS one2018

Simultaneous quantum yield measurements of carbon uptake and oxygen evolution in microalgal cultures.

Niu Du, Pardis Gholami, David I Kline, Christopher L DuPont, Andrew G Dickson, Dominick Mendola, Todd Martz, Andrew E Allen, B Greg Mitchell

Abstract readComparative Study
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Niu DuScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.ORCID 0000-0001-5300-6797
Pardis GholamiScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
David I KlineScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
Christopher L DuPontJ. Craig Venter Institute, La Jolla, California, United States of America.
Andrew G DicksonScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
Dominick MendolaScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
Todd MartzScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
Andrew E AllenScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.
B Greg MitchellScripps Institution of Oceanography, University of California San Diego, La Jolla, California, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The photosynthetic quantum yield (Φ), defined as carbon fixed or oxygen evolved per unit of light absorbed, is a fundamental but rarely determined biophysical parameter. A method to estimate Φ for both net carbon uptake and net oxygen evolution simultaneously can provide important insights into energy and mass fluxes. Here we present details for a novel system that allows quantification of carbon fluxes using pH oscillation and simultaneous oxygen fluxes by integration with a membrane inlet mass spectrometer. The pHOS system was validated using Phaeodactylum tricornutum cultured with continuous illumination of 110 μmole quanta m-2 s-1 at 25°C. Furthermore, simultaneous measurements of carbon and oxygen flux using the pHOS-MIMS and photon flux based on spectral absorption were carried out to explore the kinetics of Φ in P. tricornutum during its acclimation from low to high light (110 to 750 μmole quanta m-2 s-1). Comparing results at 0 and 24 hours, we observed strong decreases in cellular chlorophyll a (0.58 to 0.21 pg cell-1), Fv/Fm (0.71 to 0.59) and maximum ΦCO2 (0.019 to 0.004) and ΦO2 (0.028 to 0.007), confirming the transition toward high light acclimation. The Φ time-series indicated a non-synchronized acclimation response between carbon uptake and oxygen evolution, which has been previously inferred based on transcriptomic changes for a similar experimental design with the same diatom that lacked physiological data. The integrated pHOS-MIMS system can provide simultaneous carbon and oxygen measurements accurately, and at the time-resolution required to resolve high-resolution carbon and oxygen physiological dynamics.

Indexed as

Hydrogen-Ion ConcentrationPhotosynthesisAcclimatizationCalibrationCarbonChlorophyll ADose-Response Relationship, RadiationEquipment DesignLightLimit of DetectionMass SpectrometryOxygenPhotosystem II Protein ComplexStramenopilesCarbonChlorophyll AOxygenPhotosystem II Protein Complex

Identifiers

PMID29920568
PMCPMC6008153

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.