Evidence map›Paper›PMID 29916805›Full record

ArticleeLife2018

The H3K4 methyltransferase Setd1b is essential for hematopoietic stem and progenitor cell homeostasis in mice.

Kerstin Schmidt, Qinyu Zhang, Alpaslan Tasdogan, Andreas Petzold, Andreas Dahl, Borros M Arneth, Robert Slany, Hans Jörg Fehling, Andrea Kranz, Adrian Francis Stewart and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
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  11. Wdr5 is essential for fetal erythropoiesis and hematopoiesis.Experimental hematology & oncology · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. Methyltransferase SET domain family and its relationship with cardiovascular development and diseases.Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2022
    Article
  16. Article
  17. Extramedullary Hematopoiesis of the Liver and Spleen.Journal of clinical medicine · 2021
    Review
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Kerstin SchmidtStem Cell Engineering, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.ORCID http://orcid.org/0000-0002-9596-4026
Qinyu ZhangGenomics, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.
Alpaslan TasdoganInstitute of Immunology, University Hospital Ulm, Ulm, Germany.
Andreas PetzoldDeep Sequencing Group, DFG - Center for Regenerative Therapies Dresden, Dresden, Germany.
Andreas DahlDeep Sequencing Group, DFG - Center for Regenerative Therapies Dresden, Dresden, Germany.
Borros M ArnethInstitute of Laboratory Medicine and Pathobiochemistry, Molecular Diagnostics, Hospital of the Universities Giessen and Marburg, Giessen, Germany.ORCID http://orcid.org/0000-0002-9793-0970
Robert SlanyDepartment of Genetics, Friedrich Alexander Universität Erlangen, Erlangen, Germany.ORCID http://orcid.org/0000-0002-2028-9759
Hans Jörg FehlingInstitute of Immunology, University Hospital Ulm, Ulm, Germany.
Andrea KranzGenomics, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.ORCID https://orcid.org/0000-0002-7481-0220
Adrian Francis StewartGenomics, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.ORCID http://orcid.org/0000-0002-4754-1707
Konstantinos AnastassiadisStem Cell Engineering, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.ORCID http://orcid.org/0000-0002-9814-0559
Technische Universität Dresden · DEUniversity Hospital Ulm · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DEUniversitätsklinikum Gießen und Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hematopoietic stem cells require MLL1, which is one of six Set1/Trithorax-type histone 3 lysine 4 (H3K4) methyltransferases in mammals and clinically the most important leukemia gene. Here, we add to emerging evidence that all six H3K4 methyltransferases play essential roles in the hematopoietic system by showing that conditional mutagenesis of Setd1b in adult mice provoked aberrant homeostasis of hematopoietic stem and progenitor cells (HSPCs). Using both ubiquitous and hematopoietic-specific deletion strategies, the loss of Setd1b resulted in peripheral thrombo- and lymphocytopenia, multilineage dysplasia, myeloid-biased extramedullary hematopoiesis in the spleen, and lethality. By transplantation experiments and expression profiling, we determined that Setd1b is autonomously required in the hematopoietic lineages where it regulates key lineage specification components, including

Indexed as

AnimalsBone Marrow TransplantationCCAAT-Enhancer-Binding ProteinsCell LineageGATA1 Transcription FactorGene Expression ProfilingGene Expression RegulationGenes, LethalHematopoiesisHematopoietic Stem CellsHistone-Lysine N-MethyltransferaseHomeostasisIsoenzymesKruppel-Like Transcription FactorsLymphopeniaMiceCCAAT-Enhancer-Binding ProteinsCEBPA protein, mouseerythroid Kruppel-like factorGata1 protein, mouseGATA1 Transcription FactorHistone-Lysine N-MethyltransferaseIsoenzymesKmt2a protein, mouseKruppel-Like Transcription FactorsMyeloid-Lymphoid Leukemia Proteinconditional mutagenesisdevelopmental biologyH3K4 methylationhematopoietic stem and progenitor cellsmouseregenerative medicineSetd1bstem cells

Identifiers

PMID29916805
PMCPMC6025962
OpenAlexW2808833937

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.