Evidence map›Paper›PMID 29915701›Full record

ArticlePeerJ2018

Seasonal dynamics alter taxonomical and functional microbial profiles in Pampa biome soils under natural grasslands.

Anthony Diego Muller Barboza, Victor Satler Pylro, Rodrigo Josemar Seminot Jacques, Paulo Ivonir Gubiani, Fernando Luiz Ferreira de Quadros, Júlio Kuhn da Trindade, Eric W Triplett, Luiz Roesch

Abstract read
In one paragraph

Article in PeerJ, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anthony Diego Muller BarbozaCentro Interdisciplinar de Pesquisas em Biotecnologia-CIP-Biotec, Universidade Federal do Pampa, São Gabriel, Brazil.
Victor Satler PylroDepartment of Soil Science, "Luiz de Queiroz" College of Agriculture, University of São Paulo-ESALQ/USP, Piracicaba, Brazil.
Rodrigo Josemar Seminot JacquesDepartamento de Solos, Programa de Pós-graduação em Ciência do Solo, Universidade Federal de Santa Maria, Santa Maria, Brazil.
Paulo Ivonir GubianiDepartamento de Solos, Programa de Pós-graduação em Ciência do Solo, Universidade Federal de Santa Maria, Santa Maria, Brazil.
Fernando Luiz Ferreira de QuadrosDepartment of Animal Science, Universidade Federal de Santa Maria, Santa Maria, Rio Grande do Sul, Brazil.
Júlio Kuhn da TrindadeDepartamento de Diagnóstico e Pesquisa Agropecuária, Secretaria Estadual da Agricultura, Pecuária e Irrigação, São Gabriel, Brazil.
Eric W TriplettDepartment of Microbiology and Cell Science, University of Florida, Gainesville, United States of America.
Luiz RoeschCentro Interdisciplinar de Pesquisas em Biotecnologia-CIP-Biotec, Universidade Federal do Pampa, São Gabriel, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil microbial communities' assembly is strongly tied to changes in temperature and moisture. Although microbial functional redundancy seems to overcome taxonomical composition changes, the sensitivity and resilience of soil microbial communities from subtropical regions in response to seasonal variations are still poorly understood. Thus, the development of new strategies for biodiversity conservation and sustainable management require a complete understanding of the soil abiotic process involved in the selection of microbial taxa and functions. In this work, we used state of the art molecular methodologies (Next Generation Sequencing) to compare the taxonomic (metataxonomics) and functional (metatranscriptomics) profiles among soil samples from two subtropical natural grasslands located in the Pampa biome, Brazil, in response to short-term seasonal variations. Our data suggest that grasslands maintained a stable microbial community membership along the year with oscillation in abundance. Apparently soil microbial taxa are more susceptible to natural climatic disturbances while functions are more stable and change with less intensity along the year. Finally, our data allow us to conclude that the most abundant microbial groups and functions were shared between seasons and locations reflecting the existence of a stable taxonomical and functional core microbiota.

Indexed as

16S rRNA geneAbiotic factorsIon Torrent PGMMetataxonomicsMetatranscriptomicsNGSSeasonsSoil microbial coreSubtropical ecosystems

Identifiers

PMID29915701
PMCPMC6004115

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.