Evidence map›Paper›PMID 29915334›Full record

ArticleScientific reports2018

Highly accurate model for prediction of lung nodule malignancy with CT scans.

Jason L Causey, Junyu Zhang, Shiqian Ma, Bo Jiang, Jake A Qualls, David G Politte, Fred Prior, Shuzhong Zhang, Xiuzhen Huang

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  5. The impact of scanner domain shift on deep learning performance in medical imaging: an experimental study.International journal of computer assisted radiology and surgery · 2026
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jason L CauseyDepartment of Computer Science, Arkansas State University, Jonesboro, Arkansas, 72467, United States of America.
Junyu ZhangDepartment of Industrial and Systems Engineering, University of Minnesota, Minneapolis, Minnesota, 55455, United States of America.
Shiqian MaDepartment of Mathematics, University of California, Davis, California, 95616, United States of America.
Bo JiangResearch Center for Management Science and Data Analytics, School of Information Management and Engineering, Shanghai University of Finance and Economics, Shanghai, 200433, China.
Jake A QuallsDepartment of Computer Science, Arkansas State University, Jonesboro, Arkansas, 72467, United States of America.
David G PolitteMallinckrodt Institute of Radiology, Washington University, St. Louis, Missouri, 63110, United States of America.
Fred PriorDepartment of Biomedical Informatics, University of Arkansas for Medical Sciences, Little Rock, Arkansas, 72205, United States of America. fwprior@uams.edu.ORCID 0000-0002-6314-5683
Shuzhong ZhangDepartment of Industrial and Systems Engineering, University of Minnesota, Minneapolis, Minnesota, 55455, United States of America. zhangs@umn.edu.
Xiuzhen HuangDepartment of Computer Science, Arkansas State University, Jonesboro, Arkansas, 72467, United States of America. xhuang@astate.edu.ORCID 0000-0003-0498-3131

Funding

Understanding Hesitant AdoptersP20GM103429 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Lawrence E Cornett, JERRY WARE · 2012 to 2026
$60.9M
Resources for development and validation of Radiomic analyses & Adaptive TherapyU01CA187013 · NCI · WASHINGTON UNIVERSITY · PI PRIOR, FRED WILLIAM, SHARMA, ASHISH · 2014 to 2018
$2.6M
Biomedical Computing and Informatics Strategies for Precision MedicineR01LM012601 · NLM · UNIVERSITY OF PENNSYLVANIA · PI HUANG, XIUZHEN, MOORE, JASON H. · 2017 to 2020
$1.8M
NCI NIH HHS U01 CA187013NIGMS NIH HHS P20 GM103429NLM NIH HHS R01 LM012601
6 · The paper itself

Abstract

Computed tomography (CT) examinations are commonly used to predict lung nodule malignancy in patients, which are shown to improve noninvasive early diagnosis of lung cancer. It remains challenging for computational approaches to achieve performance comparable to experienced radiologists. Here we present NoduleX, a systematic approach to predict lung nodule malignancy from CT data, based on deep learning convolutional neural networks (CNN). For training and validation, we analyze >1000 lung nodules in images from the LIDC/IDRI cohort. All nodules were identified and classified by four experienced thoracic radiologists who participated in the LIDC project. NoduleX achieves high accuracy for nodule malignancy classification, with an AUC of ~0.99. This is commensurate with the analysis of the dataset by experienced radiologists. Our approach, NoduleX, provides an effective framework for highly accurate nodule malignancy prediction with the model trained on a large patient population. Our results are replicable with software available at http://bioinformatics.astate.edu/NoduleX .

Indexed as

Models, BiologicalTomography, X-Ray ComputedCohort StudiesDatabases as TopicHumansImage Processing, Computer-AssistedLung NeoplasmsNeural Networks, ComputerROC CurveSoftwareSolitary Pulmonary Nodule

Identifiers

PMID29915334
PMCPMC6006355

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.