ArticleScientific reports2018
Global analysis of threonine metabolism genes unravel key players in rice to improve the abiotic stress tolerance.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed.
- The Effects of Acorn Origin, Environmental Microbiomes and Local Adaptation on the Leaf Metabolome.Journal of chemical ecology · 2026Article
- Enhancing Plant Resistance to Sri Lankan Cassava Mosaic Virus Using Salicylic Acid.Metabolites · 2025Article
- Article
- Toxicity of Moxifloxacin on the Growth, Photosynthesis, Antioxidant System, and Metabolism ofToxics · 2024Article
- Integrating physiological and multi-omics methods to elucidate heat stress tolerance for sustainable rice production.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024Review
- Article
- Phenolic Content, Amino Acids, Volatile Compounds, Antioxidant Capacity, and Their Relationship in Wild Garlic (Foods (Basel, Switzerland) · 2023Article
- Omics-driven exploration and mining of key functional genes for the improvement of food and fiber crops.Frontiers in plant science · 2023Review
- Study of the Pollen Grain Metabolome under Deposition of Nitrogen and Phosphorus inInternational journal of molecular sciences · 2022Article
- Physiological and Metabolic Responses of Gac Leaf (Plants (Basel, Switzerland) · 2022Article
- Root exudate composition reflects drought severity gradient in blue grama (Bouteloua gracilis).Scientific reports · 2022Article
- Multi-Omics and Integrative Approach towards Understanding Salinity Tolerance in Rice: A Review.Biology · 2022Review
- Metabolomics: a systems biology approach for enhancing heat stress tolerance in plants.Plant cell reports · 2022Review
- Metabolic Circuits in Sap Extracts Reflect the Effects of a Microbial Biostimulant on Maize Metabolism under Drought Conditions.Plants (Basel, Switzerland) · 2022Article
- Global Integrated Genomic and Transcriptomic Analyses of MYB Transcription Factor Superfamily in C3 Model PlantFrontiers in genetics · 2022Article
- Red Beetroot's NMR-Based Metabolomics: Phytochemical Profile Related to Development Time and Production Year.Foods (Basel, Switzerland) · 2021Article
- An Overview of Abiotic Stress in Cereal Crops: Negative Impacts, Regulation, Biotechnology and Integrated Omics.Plants (Basel, Switzerland) · 2021Review
- Differential Morpho-Physiological and Transcriptomic Responses to Heat Stress in Two Blueberry Species.International journal of molecular sciences · 2021Article
- Salinity Duration Differently Modulates Physiological Parameters and Metabolites Profile in Roots of Two Contrasting Barley Genotypes.Plants (Basel, Switzerland) · 2021Article
- Omics and CRISPR-Cas9 Approaches for Molecular Insight, Functional Gene Analysis, and Stress Tolerance Development in Crops.International journal of molecular sciences · 2021Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The diversity in plant metabolites with improved phytonutrients is essential to achieve global food security and sustainable crop yield. Our study using computational metabolomics genome wide association study (cmGWAS) reports on a comprehensive profiling of threonine (Thr) metabolite in rice. Sixteen abiotic stress responsive (AbSR) - Thr metabolite producing genes (ThrMPG), modulate metabolite levels and play a significant role determining both physiological and nutritional importance of rice. These AbSR-ThrMPG were computationally analysed for their protein properties using OryzaCyc through plant metabolic network analyser. A total of 1373 and 1028 SNPs were involved in complex traits and genomic variations. Comparative mapping of AbSR-ThrMPG revealed the chromosomal colinearity with C4 grass species. Further, computational expression pattern of these genes predicted a differential expression profiling in diverse developmental tissues. Protein interaction of protein coding gene sequences revealed that the abiotic stresses (AbS) are multigenic in nature. In silico expression of AbSR-ThrMPG determined the putative involvement in response to individual AbS. This is the first comprehensive genome wide study reporting on AbSR -ThrMPG analysis in rice. The results of this study provide a pivotal resource for further functional investigation of these key genes in the vital areas of manipulating AbS signaling in rice improvement.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.